Variable Number Tandem Repeats in the Mitochondrial DNA of .

Genes (Basel)

Division of Applied Life Science and Research Institute of Life Sciences, Gyeongsang National University, Jinju 52828, Korea.

Published: July 2019

AI Article Synopsis

  • VNTRs in mitochondrial DNA (mtDNA) are significant for understanding mtDNA variation and serve as useful genetic markers.
  • The study identified two types of VNTRs: Type I, which consist of two types of repeat units in a symmetrical pattern, and Type II, with tandem repeats of 7- or 17-bp sequences, varying among different mtDNA strains.
  • Research demonstrated that during dikaryon formation, one nucleus preferentially integrates into the monokaryotic cytoplasm, leading to the discovery of six new VNTRs, suggesting that these repeat units can elongate during mtDNA replication through a specific mechanistic process.

Article Abstract

Variable number tandem repeats (VNTRs) in mitochondrial DNA (mtDNA) of are of interest for their role in mtDNA variation and their application as genetic marker. Sequence analysis of three mtDNAs revealed the presence of VNTRs of two categories. Type I VNTRs consist of two types of repeat units in a symmetric distribution, whereas Type II VNTRs contain tandemly arrayed repeats of 7- or 17-bp DNA sequences. The number of repeat units was variable depending on the mtDNA of different strains. Using the variations in VNTRs as a mitochondrial marker and the A mating type as a nuclear type marker, we demonstrated that one of the two nuclei in the donor dikaryon preferentially enters into the monokaryotic cytoplasm to establish a new dikaryon which still retains the mitochondria of the monokaryon in the individual mating. Interestingly, we found 6 VNTRs with newly added repeat units from the 22 mates, indicating that elongation of VNTRs occurs during replication of mtDNA. This, together with comparative analysis of the repeating pattern, enables us to propose a mechanistic model that explains the elongation of Type I VNTRs through reciprocal incorporation of basic repeat units, 5'-TCCCTTTAGGG-3' and its complementary sequence (5'-CCCTAAAGGGA-3').

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6679062PMC
http://dx.doi.org/10.3390/genes10070542DOI Listing

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