A Gram-strain negative, aerobic, catalase and oxidase positive, non-motile, short rod-shaped bacterium, designated 17mud1-8, was isolated from mud collected from Nowon-gu, Seoul, South Korea. The strain was found to be able to grow at 10-40 °C (optimum 28-30 °C), pH 5.0-8.0 (optimum 7.0), and in the absence of NaCl. The nearly full-length 16S rRNA gene of strain 17mud1-8 exhibits sequence similarity of 94.1% with that of Panacibacter ginsenosidivorans Gsoil 1550, followed by 93.6% sequence similarity with Parafilimonas terrae DSM 28286. Phylogenetic analysis indicated that strain 17mud1-8 belongs to the family Chitinophagaceae, sharing approximately 94.1-91.9% sequence similarity with members of closely related genera. The respiratory quinone was identified as MK-7. The predominant fatty acids were found to consist of iso-C, iso-Cω5c and iso-C G. The polar lipids were identified as phosphatidylethanolamine, an unidentified aminophospholipid, an unidentified glycolipid, ten unidentified aminolipids and seven unidentified lipids. The draft genome of 17mud1-8 has G+C content of 40.9 mol% and a 5.8 Mb chromosome. On the basis of the phenotypic and genotypic properties, and phylogenetic inference, strain 17mud1-8 was found to represent a novel genus in the family Chitinophagaceae, for which the name Ilyomonas limi gen. nov., sp. nov. is proposed, with the type strain 17mud1-8(=KCTC 52874 = NBRC 112826).
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BioTech (Basel)
December 2024
Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, 32 Vavilova, 119991 Moscow, Russia.
The white poplar () is a dioecious woody plant with significant potential for the phytoremediation of soils. To realize this potential, it is necessary to utilize growth-promoting microorganisms. One potential source of such beneficial microorganisms is the rhizosphere community of wild-growing trees.
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November 2024
College of Rural Revitalization, Jiangsu Open University, Nanjing, China.
A Gram-stain-negative bacterium, designated strain LY-5, was isolated from an activated sludge sample collected from a river in Yancheng city, Jiangsu province, China. Cells of strain LY-5, were strictly aerobic, non-motile and rod-shaped. Growth occurred at 15-37 °C (optimum, 30 °C), at pH 5.
View Article and Find Full Text PDFMicrobiome
October 2024
National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, 430070, People's Republic of China.
Front Microbiol
October 2024
Faculty of Forestry and Wood Sciences, Czech University of Life Sciences Prague, Prague, Czechia.
Background: Climate change has recently boosted the severity and frequency of pine bark beetle attacks. The bacterial community associated with these beetles acts as "hidden players," enhancing their ability to infest and thrive on defense-rich pine trees. There is limited understanding of the environmental acquisition of these hidden players and their life stage-specific association with different pine-feeding bark beetles.
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October 2024
Centro de Investigación en Alimentación y Desarrollo A.C., Av. Sábalo Cerritos S/N., 82112, Mazatlán, Sinaloa, Mexico.
High-density stress can lead to dysbiotic microbiota, affecting the organism's metabolic, and protective functions. Agavin is a fructan with prebiotic properties that regulate the gut microbiota by promoting the growth of beneficial bacteria. This study evaluated the effect of agavin on the gut microbiota using Next-Generation Sequencing (NGS) and its correlation with the growth parameters.
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