Efficient (linear time) algorithms are described for identifying global molecular sequence features allowing for errors including repeats, matches between sequences, dyad symmetry pairings, and other sequence patterns. A multiple sequence alignment algorithm is also described. Specific applications are given to hepatitis B viruses and the J5-C (J, joining; C, constant) region of the immunoglobulin kappa gene.
Download full-text PDF |
Source |
|---|---|
| http://www.ncbi.nlm.nih.gov/pmc/articles/PMC279651 | PMC |
| http://dx.doi.org/10.1073/pnas.85.3.841 | DOI Listing |
Publication Analysis
Top Keywords
molecular sequence
8
efficient algorithms
4
algorithms molecular
4
sequence
4
sequence analysis
4
analysis efficient
4
efficient linear
4
linear time
4
time algorithms
4
algorithms described
4
Similar Publications
Want AI Summaries of new PubMed Abstracts delivered to your In-box?
Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!