The collisional activation of protonated -propyl-2-nitroaniline obtained by electrospray ionization shows two major competitive dissociation pathways: the elimination of the elements of propionic acid, [M + H - CHO] to give an 107 ion, and of the elements of ethanol, [M + H - CHO] to give an 135 ion. The mechanistic study reported here addresses these unusual fragmentations to reveal that both occur via a common intermediate formed by the transfer of an oxygen atom from the nitro group to the first carbon atom of the propyl group, allowing elimination of propionic acid and (HO + ethene), respectively. The corresponding loss of CHO does not occur when the propyl group is replaced by an ethyl group, but elimination of the elements of propanol does occur when propyl is replaced by a butyl group. Further, the product ions of 107 and 135 are also formed when the propyl chain is replaced with a hexyl group.
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http://dx.doi.org/10.1016/j.ijms.2016.06.008 | DOI Listing |
J Chem Phys
December 2024
Center for Combustion Energy, Tsinghua University, Beijing 100084, People's Republic of China.
The change of the vibrational energy within a molecule after collisions with another molecule plays an essential role in the evolution of molecular internal energy distributions, which is also the limiting process in the relaxation of gases toward equilibrium. Here, we investigate the energy transfer between the translational motion and the vibrational motion of the diatom during the atom-diatom collision, the simplest case involving the transfer between inter-molecular and intra-molecular energies. We are interested in the situation when the translational temperature of the gas is high, in which case, there are significant probabilities for the vibrational energy to change over widely separated energy levels after a collision.
View Article and Find Full Text PDFJ Phys Chem Lett
December 2024
Combustion Research Facility, Sandia National Laboratories, Livermore, California 94550, United States.
We demonstrate the capability of a narrow linewidth quantum cascade laser (QCL) to selectively excite a very narrow velocity range of nitric oxide (σ ≤ 7(3) m/s) with a pure ro-vibrational quantum state. By implementing a counter-propagating geometry, the molecules are selectively excited according to the Doppler shift of the ro-vibrational transition frequency such that the velocity width associated with the excited molecules depends only on the QCL linewidth. We demonstrate a velocity distribution limited by the effective linewidth of our free-running QCL (Γ = 3.
View Article and Find Full Text PDFMethods Mol Biol
November 2024
Beijing Key Laboratory of DNA Damage Response and College of Life Sciences, Capital Normal University, Beijing, China.
Polo-like kinase 1 (PLK1) is a crucial mitotic kinase that is implicated in various aspects of cell cycle. Many post-translational modifications have been identified on PLK1 to regulate its activation, stability, and localization. PLK1 has been shown previously to colocalize with the O-linked β-N-acetylglucosamine (O-GlcNAc) transferase (OGT), and OGT regulates PLK1 stability.
View Article and Find Full Text PDFJ Am Soc Mass Spectrom
January 2025
School of Biosciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, U.K.
Native mass spectrometry analysis of proteins directly from tissues can be performed by using nanospray-desorption electrospray ionization (nano-DESI). Typically, supplementary collisional activation is essential to decluster protein complex ions from solvent, salt, detergent, and lipid clusters that comprise the ion beam. As an alternative, we have implemented declustering by infrared (IR) photoactivation on a linear ion trap mass spectrometer equipped with a CO laser (λ = 10.
View Article and Find Full Text PDFRev Sci Instrum
November 2024
Max Planck Institute for Plasma Physics, Boltzmannstr. 2, 85748 Garching, Germany.
A new thermal helium beam diagnostic has been implemented in the outer lower divertor of the ASDEX Upgrade tokamak. The purpose of this diagnostic is to measure two-dimensional profiles of electron density (ne) and temperature (Te) with high temporal and spatial resolution. The geometry of the lines of sight is chosen to avoid the influence of prompt recycling and to optimize the resolution without significantly impacting the divertor structure.
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