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Quantitative Structure-Activity Relationships for Structurally Diverse Chemotypes Having Anti- Activity. | LitMetric

Quantitative Structure-Activity Relationships for Structurally Diverse Chemotypes Having Anti- Activity.

Int J Mol Sci

Laboratory of Computational and Medicinal Chemistry, Center for Research and Innovation in Biodiversity and Drug Discovery, Physics Institute of Sao Carlos, University of Sao Paulo, Sao Carlos-SP 13563-120, Brazil.

Published: June 2019

AI Article Synopsis

Article Abstract

Small-molecule compounds that have promising activity against macromolecular targets from occasionally fail when tested in whole-cell phenotypic assays. This outcome can be attributed to many factors, including inadequate physicochemical and pharmacokinetic properties. Unsuitable physicochemical profiles usually result in molecules with a poor ability to cross cell membranes. Quantitative structure-activity relationship (QSAR) analysis is a valuable approach to the investigation of how physicochemical characteristics affect biological activity. In this study, artificial neural networks (ANNs) and kernel-based partial least squares regression (KPLS) were developed using anti- activity data for broadly diverse chemotypes. The models exhibited a good predictive ability for the test set compounds, yielding values of 0.81 and 0.84 for the ANN and KPLS models, respectively. The results of this investigation highlighted privileged molecular scaffolds and the optimum physicochemical space associated with high anti- activity, which provided important guidelines for the design of novel trypanocidal agents having drug-like properties.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6600563PMC
http://dx.doi.org/10.3390/ijms20112801DOI Listing

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