Dissipative particle dynamics simulation of critical pore size in a lipid bilayer membrane.

R Soc Open Sci

Division of Applied Mathematics, Brown University, Providence, RI 02912, USA.

Published: March 2019

We investigate with computer simulations the critical radius of pores in a lipid bilayer membrane. Ilton (Ilton 2016 , 257801 (doi:10.1103/PhysRevLett.117.257801)) recently showed that nucleated pores in a homopolymer film can increase or decrease in size, depending on whether they are larger or smaller than a critical size which scales linearly with film thickness. Using dissipative particle dynamics, a particle-based simulation method, we investigate the same scenario for a lipid bilayer membrane whose structure is determined by lipid-water interactions. We simulate a perforated membrane in which holes larger than a critical radius grow, while holes smaller than the critical radius close, as in the experiment of Ilton (Ilton 2016 , 257801 (doi:10.1103/PhysRevLett.117.257801)). By altering key system parameters such as the number of particles per lipid and the periodicity, we also describe scenarios in which pores of any initial size can seal or even remain stable, showing a fundamental difference in the behaviour of lipid membranes from polymer films.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6458407PMC
http://dx.doi.org/10.1098/rsos.181657DOI Listing

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