We carried out a theoretical study on geometries, relative energies of stationary points, and reaction rate constants for ethyl + O, propyl + O, and butyl + O reactions, which are important reactions in the low-temperature oxidation of corresponding alkanes. Geometries with CCSD(T)/aug-cc-pVTZ for the ethyl + O system are adopted as the benchmark to choose a proper exchange-correlation functional for geometry optimization. Our results show that B3LYP with 6-311+G(d,p) can provide reliable structures for this system, and structures of the other two systems are determined with this functional. The performances of the explicitly correlated CCSD(T)-F12a and the locally correlated DLPNO-CCSD(T) methods on barrier heights and reaction energies are evaluated by comparing their results with those of CCSD(T)/aug-cc-pVQZ for the ethyl + O system. Our results indicate that reliable energy differences for this system are achieved with CCSD(T)-F12a using the cc-pVDZ-F12 basis set, and this method is employed in calculating single-point energies for the other two systems. The single-reference equation-of-motion spin-flip coupled-cluster method is adopted to obtain the potential energy surface of the barrierless reaction CH· + O → CHCHOO·, and the results are compared with those using broken-symmetry density functional theory and the Morse potential. Differences between energies with these methods are <1.6 kcal/mol, but the difference in the rate constants could be sizable at temperatures <500 K, and rate constants obtained in this work are reliable only for temperatures >500 K. Pressure-dependent rate constants for these reactions are determined using the Rice-Ramsperger-Kassel-Marcus/Master equation method. The obtained reaction energies, barrier heights, and rate constants could be valuable for reactions between the large alkane radical and O, which are important in the low-temperature combustion of fuels such as kerosene and gasoline.
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http://dx.doi.org/10.1021/acs.jpca.9b01496 | DOI Listing |
Front Biosci (Landmark Ed)
December 2024
Department of Biochemistry, Cell Biology and Microbiology, Mari State University, 424001 Yoshkar-Ola, Russia.
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Front Biosci (Landmark Ed)
December 2024
Department of Immunology, Institute of Biomedical Research Universidad Nacional Autónoma de México, UNAM, 04510 Mexico City, Mexico.
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December 2024
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View Article and Find Full Text PDFFront Biosci (Landmark Ed)
December 2024
Department of Pathology, The First Affiliated Hospital of Soochow University, 215123 Suzhou, Jiangsu, China.
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J Integr Neurosci
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Federal State Budgetary Educational Institution, Institute of Theoretical and Experimental Biophysics, 142290 Pushchino, Russia.
Background: Long-term use of levodopa, a metabolic precursor of dopamine (DA) for alleviation of motor symptoms in Parkinson's disease (PD), can cause a serious side effect known as levodopa-induced dyskinesia (LID). With the development of LID, high-frequency gamma oscillations (~100 Hz) are registered in the motor cortex (MCx) in patients with PD and rats with experimental PD. Studying alterations in the activity within major components of motor networks during transition from levodopa-off state to dyskinesia can provide useful information about their contribution to the development of abnormal gamma oscillations and LID.
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