Using Python for Spatially Resolved Modeling with Simmune.

Methods Mol Biol

Computational Biology Section, Laboratory of Systems Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.

Published: July 2019

Mechanistic models are an important tool to gain insights about the quantitative behavior of cell-biological signal transduction networks. Here we show how Simmune can be used in conjunction with IPython to create repeatable, self-contained analyses of signal transduction processes in spatially inhomogeneous environments.

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Source
http://dx.doi.org/10.1007/978-1-4939-9102-0_7DOI Listing

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