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The First Complete Genome Sequence of a Novel RNA Virus-1 (TbRV-1). | LitMetric

The First Complete Genome Sequence of a Novel RNA Virus-1 (TbRV-1).

Viruses

Fuzhou Entry-Exit Inspection & Quarantine Bureau of P.R.C, Fuzhou 350002, China.

Published: March 2019

The complete sequence of a novel RNA virus isolated from (TbRV-1) was determined to be 12,239 nucleotides in length with five non-overlapping, linearly arranged coding sequences (CDS), potentially encoding nucleoproteins, hypothetical proteins, matrix proteins, glycoproteins, and RNA-dependent RNA polymerases. Sequence analysis indicated that the RNA-dependent RNA polymerase of TbRV-1 shares a 65% nucleotide and 67% amino acid sequence identity with Hubei dimarhabdovirus 2, suggesting that TbRV-1 is a member of the dimarhabdovirus supergroup. This corresponded to the result of the phylogenetic analysis. The affiliation of TbRV-1 with members of the family Rhabdoviridae was further validated by similar transcription termination motifs (GGAACUUUUUUU) to the sigmavirus. The prevalence of TbRV-1 in all tissues suggested that the virus was constitutive of, and not specific to, any wasp tissue. To our knowledge, this is the first report on the complete genome sequence of a dimarhabdovirus in parasitoids.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6466307PMC
http://dx.doi.org/10.3390/v11030257DOI Listing

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