Purpose: to develop a channelized model observer (CHO) that matches human reader (HR) scoring of a physical phantom containing breast simulating structure and mass lesion-like targets for use in quality control of digital breast tomosynthesis (DBT) imaging systems.
Methods: A total of 108 DBT scans of the phantom was acquired using a Siemens Inspiration DBT system. The detectability of mass-like targets was evaluated by human readers using a 4-alternative forced choice (4-AFC) method. The percentage correct (PC) values were then used as the benchmark for CHO tuning, again using a 4-AFC method. Three different channel functions were considered: Gabor, Laguerre-Gauss and Difference of Gaussian. With regard to the observer template, various methods for generating the expected signal were studied along with the influence of the number of training images used to form the covariance matrix for the observer template. Impact of bias in the training process on the observer template was evaluated next, as well as HR and CHO reproducibility.
Results: HR performance was most closely matched by 8 Gabor channels with tuned phase, orientation and frequency, using an observer template generated from training image data. Just 24 DBT image stacks were required to give robust CHO performance with 0% bias, although a bias of up to 33% in the training images also gave acceptable performance. CHO and HR reproducibility were similar (on average 3.2 PC versus 3.4 PC).
Conclusions: The CHO algorithm developed matches human reader performance and is therefore a promising candidate for automated readout of phantom studies.
Download full-text PDF |
Source |
---|---|
http://dx.doi.org/10.1016/j.ejmp.2018.12.033 | DOI Listing |
Nat Med
January 2025
Merkin Institute of Transformative Technologies in Healthcare, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Prion disease is a fatal neurodegenerative disease caused by the misfolding of prion protein (PrP) encoded by the PRNP gene. While there is currently no cure for the disease, depleting PrP in the brain is an established strategy to prevent or stall templated misfolding of PrP. Here we developed in vivo cytosine and adenine base strategies delivered by adeno-associated viruses to permanently modify the PRNP locus to achieve PrP knockdown in the mouse brain.
View Article and Find Full Text PDFNat Struct Mol Biol
January 2025
Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, USA.
Transcription activators are said to stimulate gene expression by 'recruiting' coactivators, yet this vague term fits multiple kinetic models. To directly analyze the dynamics of activator-coactivator interactions, single-molecule microscopy was used to image promoter DNA, a transcription activator and the Spt-Ada-Gcn5 acetyltransferase (SAGA) complex within yeast nuclear extract. SAGA readily but transiently binds nucleosome-free DNA without an activator, while chromatin association occurs primarily when an activator is present.
View Article and Find Full Text PDFSci Rep
January 2025
Department of Radiology, The First Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, 330006, Jiangxi, China.
The conventional statistical approach for analyzing resting state functional MRI (rs-fMRI) data struggles to accurately distinguish between patients with multiple sclerosis (MS) and those with neuromyelitis optic spectrum disorders (NMOSD), highlighting the need for improved diagnostic efficacy. In this study, multilevel functional metrics including resting state functional connectivity, amplitude of low frequency fluctuation (ALFF), and regional homogeneity (ReHo) were calculated and extracted from 116 regions of interest in the anatomical automatic labeling atlas. Subsequently, classifiers were developed using different combinations of these selected features to distinguish between MS and NMOSD.
View Article and Find Full Text PDFJ Control Release
January 2025
State Key Laboratory of Food Science and Resources, China-Canada Joint Lab of Food Science and Technology (Nanchang), Key Laboratory of Bioactive Polysaccharides of Jiangxi Province, Nanchang University, Nanchang 330047, China.
Selenium deficiency associated with a high risk of many diseases remains a global challenge. Owing to the narrow margin between "nutrition-toxicity" doses of selenium, it is imperative to achieve accurate selenium supplement. Nano‑selenium (SeNPs) is a novel form of selenium supplement with low toxicity, but it could be trapped and removed by intestinal mucus, thus limiting its oral delivery.
View Article and Find Full Text PDFRSC Adv
January 2025
The Center for Chemical Biology, School of Fundamental Science and Technology, Graduate School of Science and Technology, Keio University 3-14-1 Hiyoshi, Kohoku-ku Yokohama 223-8522 Japan +81-45-566-1580 +81-45-566-1839.
We prepared a cellulose nanofiber (CNF)-based porous membrane with three dimensional cellular structures. CNF was concentrated a surfactant-induced assembly by mixing CNF with a cationic surfactant, domiphen bromide (DB). Furthermore, they were accumulated by centrifugation to obtain a CNF-DB sol.
View Article and Find Full Text PDFEnter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!