Mathematical modeling of movement on fitness landscapes.

BMC Syst Biol

Department of Chemical Engineering, Indian Institute of Technology Bombay, Powai, Mumbai, 400 076, India.

Published: February 2019

Background: Movement of populations on fitness landscapes has been a problem of interest for a long time. While the subject has been extensively developed theoretically, reconciliation of the theoretical work with recent experimental data has not yet happened. In this work, we develop a computational framework and study evolution of the simplest transcription network between a single regulator, R and a single target protein, T.

Results: Through our simulations, we track evolution of this transcription network and comment on its dynamics and statistics of this movement. Significantly, we report that there exists a critical parameter which controls the ability of a network to reach the global fitness peak on the landscape. This parameter is the fraction of all permissible values of a biochemical parameter that can be accessed from its current value via a single mutation.

Conclusions: Overall, through this work, we aim to present a general framework for analysis of movement of populations (and particularly regulatory networks) on landscapes.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6394095PMC
http://dx.doi.org/10.1186/s12918-019-0704-0DOI Listing

Publication Analysis

Top Keywords

fitness landscapes
8
movement populations
8
transcription network
8
mathematical modeling
4
movement
4
modeling movement
4
movement fitness
4
landscapes background
4
background movement
4
populations fitness
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!