Crassulacean acid metabolism (CAM) is a specialized mode of photosynthesis that exploits a temporal CO pump with nocturnal CO uptake and concentration to reduce photorespiration, improve water-use efficiency (WUE), and optimize the adaptability of plants to hotter and drier climates. Introducing the CAM photosynthetic machinery into C (or C) photosynthesis plants (CAM Biodesign) represents a potentially breakthrough strategy for improving WUE while maintaining high productivity. To optimize the success of CAM Biodesign approaches, the functional analysis of individual C metabolism cycle genes is necessary to identify the essential genes for robust CAM pathway introduction. Here, we isolated and analyzed the subcellular localizations of 13 enzymes and regulatory proteins of the C metabolism cycle of CAM from the common ice plant in stably transformed . Six components of the carboxylation module were analyzed including beta-carbonic anhydrase (), phosphoenolpyruvate carboxylase (), phosphoenolpyruvate carboxylase kinase (), NAD-dependent malate dehydrogenase (, ), and NADP-dependent malate dehydrogenase (). In addition, seven components of the decarboxylation module were analyzed including NAD-dependent malic enzyme (, ), NADP-dependent malic enzyme (, ), pyruvate, orthophosphate dikinase (), pyruvate, orthophosphate dikinase-regulatory protein (), and phosphoenolpyruvate carboxykinase (). Ectopic overexpression of most C-metabolism cycle components resulted in increased rosette diameter, leaf area, and leaf fresh weight of except for , , and Overexpression of most carboxylation module components resulted in increased stomatal conductance and dawn/dusk titratable acidity (TA) as an indirect measure of organic acid (mainly malate) accumulation in . In contrast, overexpression of the decarboxylating malic enzymes reduced stomatal conductance and TA. This comprehensive study provides fundamental insights into the relative functional contributions of each of the individual components of the core C-metabolism cycle of CAM and represents a critical first step in laying the foundation for CAM Biodesign.
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http://dx.doi.org/10.3389/fpls.2019.00101 | DOI Listing |
Nat Aging
April 2024
Cambridge Baker Systems Genomics Initiative, Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK.
ISME J
November 2023
Department of Biochemistry, University of Cambridge, Cambridge, CB2 1QW, UK.
Once acquired, hypermutation is unrelenting, and in the long-term, leads to impaired fitness due to its cumulative impact on the genome. This raises the question of why hypermutators arise so frequently in microbial ecosystems. In this work, we explore this problem by examining how the transient acquisition of hypermutability affects inter- and intra-species competitiveness, and the response to environmental insults such as antibiotic challenge.
View Article and Find Full Text PDFNature
April 2023
Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA.
Oncogene amplification on extrachromosomal DNA (ecDNA) drives the evolution of tumours and their resistance to treatment, and is associated with poor outcomes for patients with cancer. At present, it is unclear whether ecDNA is a later manifestation of genomic instability, or whether it can be an early event in the transition from dysplasia to cancer. Here, to better understand the development of ecDNA, we analysed whole-genome sequencing (WGS) data from patients with oesophageal adenocarcinoma (EAC) or Barrett's oesophagus.
View Article and Find Full Text PDFJ Clin Med
November 2022
Division of Infectious Diseases, Montefiore Medical Center, Albert Einstein College of Medicine, New York, NY 10461, USA.
Background: COVID-19-associated mucormycosis (CAM) is associated with high morbidity and mortality. MUNCO is an international database used to collect clinical data on cases of CAM in real time. Preliminary data from the Mycotic Infections in COVID-19 (MUNCO) online registry yielded 728 cases from May to September 2021 in four South Asian countries and the United States.
View Article and Find Full Text PDFEur Radiol
January 2022
Department of Radiology, Addenbrooke's Hospital and University of Cambridge, Cambridge, UK.
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