Three aerobic granular sludge systems were operated as sequencing batch reactors (SBR) with acetate, ethanol and glucose as carbon source. The SBR cycle was 6 h, with an anaerobic phase followed by an aerobic phase. The acetate granules (>1.5 mm) had the greatest microbial diversity and better results in terms of removal efficiency for carbon and nutrients (TN ≈ 72% and TP ≈ 42%) and also in the resistance tests. However, partial disintegration was observed. On the other hand, when ethanol was the substrate, the granules were stable, good nitrogen removal was achieved (TN ≈ 53%), but phosphorus removal was not favored (TP ≈ 31%). Glucose presented the lowest efficiency values for nitrogen (TN ≈ 44%) and phosphorous removal (TP ≈ 21%), and the granules formed (<1 mm) had the lowest microbial diversity. Therefore, the carbon source had a high impact on the characteristics of the granules.
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