Comparative Genomics and Infection of Field Clonal Isolates of Biovar 3 Did Not Identify Signature of Host Adaptation.

Front Microbiol

EU/OIE/FAO and National Reference Laboratory for Brucellosis, Animal Health Laboratory, Anses/Paris-Est University, Maisons-Alfort, France.

Published: October 2018

spp. are responsible for brucellosis, a widespread zoonosis causing reproductive disorders in animals. Species-classification within this monophyletic genus is based on bacteriological and biochemical phenotyping. Traditionally, species are reported to have a preferential, but not exclusive mammalian host. However, this concept can be challenged since many species infect a wide range of animal species. Adaptation to a specific host can be a driver of pathogen variation. It is generally thought that species have highly stable and conserved genomes, however the degree of genomic variation during natural infection has not been documented. Here, we investigated potential genetic diversity and virulence of biovar 3 field isolates obtained from a single outbreak but from different host species (human, bovine, small ruminants). A unique MLVA-16 pattern suggested all isolates were clonal. Comparative genomic analyses showed an almost non-existent genetic diversity among isolates (only one SNP; no architectural rearrangements) and did not highlight any signature specific to host adaptation. Similarly, the strains showed identical capacities to enter and replicate in an model of macrophage infection. In our study, the absence of genomic variability and similar virulence underline that biovar 3 is a broad-host-range pathogen without the need to adapt to different hosts.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6204395PMC
http://dx.doi.org/10.3389/fmicb.2018.02505DOI Listing

Publication Analysis

Top Keywords

host adaptation
8
specific host
8
genetic diversity
8
host
5
species
5
comparative genomics
4
genomics infection
4
infection field
4
field clonal
4
isolates
4

Similar Publications

Differential detoxification enzyme profiles in C-corn strain and R-rice strain of Spodoptera frugiperda by comparative genomic analysis: insights into host adaptation.

BMC Genomics

January 2025

Provincial Key Laboratory for Agricultural Pest Management of Mountainous Region, Institute of Entomology, Guizhou University, Guiyang, 550025, China.

Background: The fall armyworm (FAW) Spodoptera frugiperda, a highly invasive, polyphagous pest, poses a global agricultural threat. It has two strains, the C-corn and R-rice strains, each with distinct host preferences. This study compares detoxification enzyme gene families across these strains and related Spodoptera species to explore their adaptation to diverse host plant metabolites.

View Article and Find Full Text PDF

Identification of cellular signatures associated with chinese hamster ovary cell adaptation for secretion of antibodies.

Comput Struct Biotechnol J

December 2024

Cell Culture and Fermentation Sciences, BioPharmaceutical Development, AstraZeneca, Cambridge UK.

The secretory capacity of Chinese hamster ovary (CHO) cells remains a fundamental bottleneck in the manufacturing of protein-based therapeutics. Unconventional biological drugs with complex structures and processing requirements are particularly problematic. Although engineered vector DNA elements can achieve rapid and high-level therapeutic protein production, a high metabolic and protein folding burden is imposed on the host cell.

View Article and Find Full Text PDF

Deep Multitask Learning-Driven Discovery of New Compounds Targeting .

ACS Omega

December 2024

Laboratory of Cheminformatics, Faculty of Pharmacy, Universidade Federal de Goiás, Goiânia 74605-170, Brazil.

Visceral leishmaniasis caused by is a severe and often fatal disease prevalent in low- and middle-income countries. Existing treatments are hampered by toxicity, high costs, and the emergence of drug resistance, highlighting the urgent need for novel therapeutics. In this context, we developed an explainable multitask learning (MTL) pipeline to predict the antileishmanial activity of compounds against three species, with a primary focus on .

View Article and Find Full Text PDF

Orthogonal RNA replication enables directed evolution and Darwinian adaptation in mammalian cells.

Nat Chem Biol

January 2025

Center for Quantitative Biology, Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, China.

Directed evolution in mammalian cells offers a powerful approach for advancing synthetic biology applications. However, existing mammalian-based directed evolution methods face substantial bottlenecks, including host genome interference, small library size and uncontrolled mutagenesis. Here we engineered an orthogonal alphaviral RNA replication system to evolve RNA-based devices, enabling RNA replicase-assisted continuous evolution (REPLACE) in proliferating mammalian cells.

View Article and Find Full Text PDF

Catalysis and specifically autocatalysis are the quintessential building blocks of life. Yet, although autocatalytic networks are necessary, they are not sufficient for the emergence of life-like properties, such as replication and adaptation. The ultimate and potentially fatal threat faced by molecular replicators is parasitism; if the polymerase error rate exceeds a critical threshold, even the fittest molecular species will disappear.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!