Mining (LEA) Family Genes in , a Xerophyte Perennial Desert Plant.

Int J Mol Sci

State Key Laboratory of Grassland Agro-ecosystems; Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture; College of Pastoral Agriculture Science and Technology, Lanzhou University; Lanzhou 730000, China.

Published: November 2018

AI Article Synopsis

  • Plant growth relies on maintaining cellular balance under stress, with xerophyte desert plants showing unique drought adaptations and stress tolerance genes.
  • This study identified 44 putative LEA family genes in the plant genome, categorized into eight subfamilies based on their protein structures.
  • Analysis revealed that certain subfamily genes are highly responsive to heat stress and ABA treatment, suggesting potential for enhancing crop resilience to environmental stressors.

Article Abstract

Plant growth and development depends on its ability to maintain optimal cellular homeostasis during abiotic and biotic stresses. , a xerophyte desert plant, is known to have novel drought stress adaptation strategies and contains rich pools of stress tolerance genes. Proteins encoded by (LEA) family genes promote cellular activities by functioning as disordered molecules, or by limiting collisions between enzymes during stresses. To date, functions of the family genes have been heavily investigated in many plant species except perennial monocotyledonous species. In this study, 44 putative genes were identified in the genome and were grouped into eight subfamilies, based on their conserved protein domains and domain organizations. Phylogenetic analyses indicated that Dehydrin and LEA_2 subfamily proteins shared high sequence homology with stress responsive Dehydrin proteins from Arabidopsis. Additionally, promoter regions of or subfamily genes were rich in G-box, drought responsive (MBS), and/or Abscisic acid responsive (ABRE) -regulatory elements. In addition, gene expression analyses indicated that genes from these two subfamilies were highly responsive to heat stress and ABA treatment, in both leaves and roots. In summary, the results from this study provided a comprehensive view of genes and the potential applications of these genes for the improvement of crop tolerance to abiotic stresses.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6274777PMC
http://dx.doi.org/10.3390/ijms19113430DOI Listing

Publication Analysis

Top Keywords

family genes
12
genes
9
lea family
8
desert plant
8
analyses indicated
8
mining lea
4
genes xerophyte
4
xerophyte perennial
4
perennial desert
4
plant
4

Similar Publications

Prostate cancer presents a major health issue, with its progression influenced by intricate molecular factors. Notably, the interplay between miRNAs and changes in transcriptomic patterns is not fully understood. Our study seeks to bridge this knowledge gap, employing computational techniques to explore how miRNAs and transcriptomic alterations jointly regulate the development of prostate cancer.

View Article and Find Full Text PDF

Genetics of Tourette Syndrome.

Psychiatr Clin North Am

March 2025

Department of Psychiatry and Yale Child Study Center, Yale School of Medicine, 230 South Frontage Road, New Haven, CT 06520, USA. Electronic address:

This review explores the genetic basis of Tourette syndrome (TS), a complex neuropsychiatric disorder characterized by motor and vocal tics. Family, twin, and molecular genetic studies provide strong evidence for a genetic component in TS, with heritability estimates ranging from 50% to 80%. The genetic architecture of TS is complex, involving both common variants with small effects and rare variants with larger effects.

View Article and Find Full Text PDF

Mitral Valve Prolapse Caused by TLL1 Gain-of-Function Mutation.

Can J Cardiol

January 2025

The Morris Kahn Laboratory of Human Genetics, Faculty of Health Sciences and National Institute of Biotechnology in the Negev, Ben Gurion University of the Negev, Be'er Sheva, Israel; Genetics Institute, Soroka University Medical Center, Be'er Sheva, Israel; The Danek Gertner Institute of Human Genetics, Sheba Medical Center, Ramat Gan, Israel. Electronic address:

Background: Mitral valve prolapse (MVP) is a common cardiac valvular anomaly that can be caused by mutations in genes of various biological pathways. Individuals of three generations of a kindred presented with apparently dominant heredity of isolated MVP.

Methods: Clinical evaluation and echocardiography for all complying family members (n=13).

View Article and Find Full Text PDF

Dysregulation of genes encoding the homologous to E6AP C-terminus (HECT) E3 ubiquitin ligases has been linked to cancer and structural birth defects. One member of this family, the HECT-domain-containing protein 1 (HECTD1), mediates developmental pathways, including cell signaling, gene expression, and embryogenesis. Through GeneMatcher, we identified 14 unrelated individuals with 15 different variants in HECTD1 (10 missense, 3 frameshift, 1 nonsense, and 1 splicing variant) with neurodevelopmental disorders (NDDs), including autism, attention-deficit/hyperactivity disorder, and epilepsy.

View Article and Find Full Text PDF

Resistance-breaking strains of tomato spotted wilt virus hamper photosynthesis and protein synthesis pathways in a virus accumulation-dependent manner in Sw5-carrying tomatoes.

Sci Rep

January 2025

Istituto per la Protezione Sostenibile delle Piante, Consiglio Nazionale delle Ricerche, via Amendola 165/A, 70126, Bari, Italy.

Tomato spotted wilt virus (TSWV; Orthotospovirus tomatomaculae) is one of the major horticultural threats due to its worldwide distribution and broad host range. In Italy, TSWV is widely spread in tomato (Solanum lycopersicum) crops and causes severe yield losses. In the last decades, several tomato varieties carrying the Sw-5b gene for resistance to TSWV have been released.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!