Objectives:: To propose a reliable and practical method for automatically segmenting the mandible from CBCT images.
Methods:: The marker-based watershed transform is a region-growing approach that dilates or "floods" predefined markers onto a height map whose ridges denote object boundaries. We applied this method to segment the mandible from the rest of the CBCT image. The height map was generated to enhance the sharp decreases of intensity at the mandible/tissue border and suppress noise by computing the intensity gradient image of the CBCT itself. Two sets of markers, "mandible" and "background" were automatically placed inside and outside the mandible, respectively in a novel image using image registration. The watershed transform flooded the gradient image by dilating the markers simultaneously until colliding at watershed lines, estimating the mandible boundary. CBCT images of 20 adolescent subjects were chosen as test cases. Segmentation accuracy of the proposed method was evaluated by measuring overlap (Dice similarity coefficient) and boundary agreement against a well-accepted interactive segmentation method described in the literature.
Results:: The Dice similarity coefficient was 0.97 ± 0.01 (mean ± SD), indicating almost complete overlap between the automatically and the interactively segmented mandibles. Boundary deviations were predominantly under 1 mm for most of the mandibular surfaces. The errors were mostly from bones around partially erupted wisdom teeth, the condyles and the dental enamels, which had minimal impact on the overall morphology of the mandible.
Conclusions:: The marker-based watershed transform method produces segmentation accuracy comparable to the well-accepted interactive segmentation approach.
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http://dx.doi.org/10.1259/dmfr.20180261 | DOI Listing |
Sensors (Basel)
January 2025
Departamento de Geografía, Facultad de Ciencias, Universidad de la República, Montevideo 4225, Uruguay.
Recent advancements in Earth Observation sensors, improved accessibility to imagery and the development of corresponding processing tools have significantly empowered researchers to extract insights from Multisource Remote Sensing. This study aims to use these technologies for mapping summer and winter Land Use/Land Cover features in Cuenca de la Laguna Merín, Uruguay, while comparing the performance of Random Forests, Support Vector Machines, and Gradient-Boosting Tree classifiers. The materials include Sentinel-2, Sentinel-1 and Shuttle Radar Topography Mission imagery, Google Earth Engine, training and validation datasets and quoted classifiers.
View Article and Find Full Text PDFSci Total Environ
January 2025
Department of Civil, Geological and Environmental Engineering, University of Saskatchewan, 57 Campus Dr, Saskatoon, Saskatchewan S7N 5A9, Canada; University of Lethbridge, Office of the Vice President (Research), Lethbridge, Alberta, Canada. Electronic address:
Naphthenic acids and naphthenic acid fraction compounds (NAFCs) are associated with production of unconventional petroleum resources, especially the Athabasca Oil Sands of Alberta, Canada. This complex mixture of acidic organic compounds is toxic to a variety of taxa, and so represents an important environmental management challenge. Thus, there is clear motivation to better understand the occurrence and characteristics of NAFCs in aquatic environments, their chemical behaviour, and environmental fate.
View Article and Find Full Text PDFToxics
November 2024
School of Environmental Science and Safety Engineering, Tianjin University of Technology, Tianjin 300384, China.
The distribution of trace metals (TMs) in a continuous water body often exhibits watershed attributes, but the tidal gates of the coastal rivers may alter their transformation and accumulation patterns. Therefore, a tidal gate-controlled coastal river was selected to test the distribution and accumulation risks of Al, As, Cr, Cu, Fe, Mn, Ni, Sr, and Zn in the catchment area (CA), estuarine area (EA), and offshore area (OA). Associations between TMs and bacterial communities were analyzed to assess the feasibility of using bacterial parameters as ecological indicators.
View Article and Find Full Text PDFSci Total Environ
December 2024
Engineering Research Center of Watershed Carbon Neutralization, Ministry of Education, Nanchang University, Nanchang 330031, China; School of Resources and Environment, Nanchang University, Nanchang 330031, China. Electronic address:
Iron (Fe) (oxyhydr)oxides and natural organic matter (NOM) are active substances ubiquitously found in sediments. Their coupled transformation plays a crucial role in the fate and release risk of heavy metal(loid)s (HMs) in lake sediments. Therefore, it is essential to systematically obtain relevant knowledge to elucidate their potential mechanism, and whether HMs provide immobilization or mobilization effect in this ternary system.
View Article and Find Full Text PDFMicrobiome
December 2024
Simon F. S. Li Marine Science Laboratory, School of Life Sciences and State Key Laboratory of Agrobiotechnology, The Chinese University of Hong Kong, Shatin, Hong Kong SAR, China.
Background: Tibetan Plateau is credited as the "Third Pole" after the Arctic and the Antarctic, and lakes there represent a pristine habitat ideal for studying microbial processes under climate change.
Results: Here, we collected 169 samples from 54 lakes including those from the central Tibetan region that was underrepresented previously, grouped them to freshwater, brackish, and saline lakes, and generated a genome atlas of the Tibetan Plateau Lake Microbiome. This genomic atlas comprises 8271 metagenome-assembled genomes featured by having significant phylogenetic and functional novelty.
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