We propose a framework for localization and classification of masses in breast ultrasound images. We have experimentally found that training convolutional neural network-based mass detectors with large, weakly annotated datasets presents a non-trivial problem, while overfitting may occur with those trained with small, strongly annotated datasets. To overcome these problems, we use a weakly annotated dataset together with a smaller strongly annotated dataset in a hybrid manner. We propose a systematic weakly and semi-supervised training scenario with appropriate training loss selection. Experimental results show that the proposed method can successfully localize and classify masses with less annotation effort. The results trained with only 10 strongly annotated images along with weakly annotated images were comparable to results trained from 800 strongly annotated images, with the 95% confidence interval (CI) of difference -3%-5%, in terms of the correct localization (CorLoc) measure, which is the ratio of images with intersection over union with ground truth higher than 0.5. With the same number of strongly annotated images, additional weakly annotated images can be incorporated to give a 4.5% point increase in CorLoc, from 80% to 84.50% (with 95% CIs 76%-83.75% and 81%-88%). The effects of different algorithmic details and varied amount of data are presented through ablative analysis.
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http://dx.doi.org/10.1109/TMI.2018.2872031 | DOI Listing |
JAMA Cardiol
January 2025
Department of Emergency Medicine, Rush University Medical Center, Chicago, Illinois.
Importance: Lung ultrasound (LUS) aids in the diagnosis of patients with dyspnea, including those with cardiogenic pulmonary edema, but requires technical proficiency for image acquisition. Previous research has demonstrated the effectiveness of artificial intelligence (AI) in guiding novice users to acquire high-quality cardiac ultrasound images, suggesting its potential for broader use in LUS.
Objective: To evaluate the ability of AI to guide acquisition of diagnostic-quality LUS images by trained health care professionals (THCPs).
Osteoporos Int
January 2025
Academy for Engineering and Technology, Fudan University, Shanghai, China.
Unlabelled: This study utilized deep learning for bone mineral density (BMD) prediction and classification using biplanar X-ray radiography (BPX) images from Huashan Hospital Medical Checkup Center. Results showed high accuracy and strong correlation with quantitative computed tomography (QCT) results. The proposed models offer potential for screening patients at a high risk of osteoporosis and reducing unnecessary radiation and costs.
View Article and Find Full Text PDFBMC Genomics
January 2025
College of Basic Medicine, Guilin Medical University, Guilin, 541199, P.R. China.
Background: Gyrodactylus von Nordmann, 1832, a genus of viviparous parasites within the family Gyrodactylidae, contains one of the largest nominal species in the world. Gyrodactylus pseudorasborae Ondračková, Seifertová & Tkachenko, 2023 widely distributed in Europe and China, although its mitochondrial genome remains unclear. This study aims to sequence the mitogenome of G.
View Article and Find Full Text PDFNPJ Biofilms Microbiomes
January 2025
Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prospekt 47, Moscow, 119991, Russia.
Biofilms are critical for understanding environmental processes, developing biotechnology applications, and progressing in medical treatments of various infections. Nowadays, a key limiting factor for biofilm analysis is the difficulty in obtaining large datasets with fully annotated images. This study introduces a versatile approach for creating synthetic datasets of annotated biofilm images with employing deep generative modeling techniques, including VAEs, GANs, diffusion models, and CycleGAN.
View Article and Find Full Text PDFSci Data
January 2025
IFREMER Délégation Océan Indien (DOI), Le Port, 97420, La Réunion, Rue Jean Bertho, France.
Citizen Science initiatives have a worldwide impact on environmental research by providing data at a global scale and high resolution. Mapping marine biodiversity remains a key challenge to which citizen initiatives can contribute. Here we describe a dataset made of both underwater and aerial imagery collected in shallow tropical coastal areas by using various low cost platforms operated either by citizens or researchers.
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