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Probing the interaction of 2,4-dichlorophenoxyacetic acid with human serum albumin as studied by experimental and computational approaches. | LitMetric

Probing the interaction of 2,4-dichlorophenoxyacetic acid with human serum albumin as studied by experimental and computational approaches.

Spectrochim Acta A Mol Biomol Spectrosc

Bioinformatics Programme, Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia; Centre of Research for Computational Sciences and Informatics for Biology, Bioindustry, Environment, Agriculture and Healthcare, University of Malaya, Kuala Lumpur, Malaysia.

Published: January 2019

AI Article Synopsis

  • The study investigates how the herbicide 2,4-D binds to human serum albumin (HSA) using various spectroscopic and computational techniques.
  • The formation of the 2,4-D-HSA complex was confirmed, revealing a weak binding affinity and identifying hydrophobic, van der Waals, and hydrogen bond interactions as key factors in the binding process.
  • Structural changes in HSA and improved thermal stability upon 2,4-D binding were also observed, with findings suggesting that the herbicide primarily binds at Sudlow's site I on the protein.

Article Abstract

To characterize the binding of a widely used herbicide, 2,4-dichlorophenoxyacetic acid (2,4-D) to the major transporter in human circulation, human serum albumin (HSA), multi-spectroscopic approaches such as fluorescence, absorption and circular dichroism along with computational methods were employed. Analysis of the fluorescence and absorption spectroscopic data confirmed the 2,4-D-HSA complex formation. A static quenching mechanism was evident from the inverse temperature dependence of the K values. The complex was stabilized by a weak binding affinity (K = 5.08 × 10 M at 298 K). Quantitative analysis of thermodynamic data revealed participation of hydrophobic and van der Waals interactions as well as hydrogen bonds in the binding process. Circular dichroism and three-dimensional fluorescence spectral results showed structural (secondary and tertiary) changes in HSA as well as microenvironmental perturbation around protein fluorophores (Trp and Tyr residues) upon 2,4-D binding. Addition of 2,4-D to HSA was found to improve protein's thermal stability. Competitive displacement results as well as computational analyses suggested preferred location of the 2,4-D binding site as Sudlow's site I (subdomain IIA) in HSA.

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Source
http://dx.doi.org/10.1016/j.saa.2018.09.033DOI Listing

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