CE-MS for metabolomics: Developments and applications in the period 2016-2018.

Electrophoresis

Biomolecular Analysis, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, The Netherlands.

Published: January 2019

In the field of metabolomics, CE-MS is now recognized as a strong analytical technique for the analysis of (highly) polar and charged metabolites in a wide range of biological samples. Over the past few years, significant attention has been paid to the design and improvement of CE-MS approaches for (large-scale) metabolic profiling studies and for establishing protocols in order to further expand the role of CE-MS in metabolomics. In this paper, which is a follow-up of a previous review paper covering the years 2014-2016 (Electrophoresis 2017, 38, 190-202), main advances in CE-MS approaches for metabolomics studies are outlined covering the literature from July 2016 to June 2018. Aspects like developments in interfacing designs and data analysis tools for improving the performance of CE-MS for metabolomics are discussed. Representative examples highlight the utility of CE-MS in the fields of biomedical, clinical, microbial, and plant metabolomics. A complete overview of recent CE-MS-based metabolomics studies is given in a table, which provides information on sample type and pretreatment, capillary coatings and MS detection mode. Finally, some general conclusions and perspectives are given.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6586046PMC
http://dx.doi.org/10.1002/elps.201800323DOI Listing

Publication Analysis

Top Keywords

ce-ms metabolomics
12
ce-ms approaches
8
metabolomics studies
8
ce-ms
7
metabolomics
6
metabolomics developments
4
developments applications
4
applications period
4
period 2016-2018
4
2016-2018 field
4

Similar Publications

Mass spectrometry (MS)-based metabolomics often rely on separation techniques when analyzing complex biological specimens to improve method resolution, metabolome coverage, quantitative performance, and/or unknown identification. However, low sample throughput and complicated data preprocessing procedures remain major barriers to affordable metabolomic studies that are scalable to large populations. Herein, we introduce PeakMeister as a new software tool in the R statistical environment to enable standardized processing of serum metabolomic data acquired by multisegment injection-capillary electrophoresis-mass spectrometry (MSI-CE-MS), a high-throughput separation platform (<4 min/sample) which takes advantage of a serial injection format of 13 samples within a single analytical run.

View Article and Find Full Text PDF

Comparison of Free Flavonoids and the Polyphenol Content in the Bran of a Newly Developed Sorghum Variety and Two Commercially Available Sorghum Varieties.

Metabolites

November 2024

Department of Biomedical Engineering, Graduate School of Medicine, Science and Technology, Shinshu University, 4-7-1 Wakasato, Nagano City 380-8553, Nagano Prefecture, Japan.

Article Synopsis
  • The study focuses on analyzing the polyphenol content, specifically free flavonoids, in the bran of a new red sorghum variety (RILN-156) compared to other commercial varieties, using a process that removes the bran.
  • Various methods, including colorimetric techniques and advanced metabolomics (LC/MS and CE/MS), were used to quantify different polyphenolic components and identify 19 flavonoids, with galangin and daidzein being the most abundant.
  • The results indicated that RILN-156 has a higher concentration of polyphenolic content and antioxidant capacity than the other varieties, suggesting its potential for industrial use and further health-related research.
View Article and Find Full Text PDF

CE-MS-Based Clinical Metabolomics of Human Plasma.

Methods Mol Biol

October 2024

Centro de Metabolómica y Bioanálisis (CEMBIO), Facultad de Farmacia, Universidad San Pablo-CEU, CEU Universities, Madrid, Spain.

Article Synopsis
  • Capillary electrophoresis-mass spectrometry (CE-MS) is an advanced analytical technique beneficial for clinical research and diagnostics, enhancing the identification of compounds in clinical samples.
  • The ability of CE to separate molecules and MS to accurately identify and quantify these compounds makes it effective for analyzing complex biological samples like human plasma.
  • A detailed protocol for conducting untargeted metabolomics studies using CE-MS is provided, focusing on its application to human plasma from Long COVID patients, covering everything from sample preparation to data interpretation.
View Article and Find Full Text PDF

Capillary electrophoresis coupled with tandem mass spectrometry (CE-MS/MS) offers advantages in peak capacity and sensitivity for metabolic profiling owing to the electroosmotic flow-based separation. However, the utilization of data-independent MS/MS acquisition (DIA) is restricted due to the absence of an optimal procedure for analytical chemistry and its related informatics framework. We assessed the mass spectral quality using two DIA techniques, namely, all-ion fragmentation (AIF) and variable DIA (vDIA), to isolate 60-800 Da precursor ions with respect to annotation rates.

View Article and Find Full Text PDF

Background/aim: F-fluorodeoxyglucose positron emission tomography/computed tomography (FDG-PET/CT) is reportedly associated with the malignant potential of cancer. This study aimed to evaluate the association between FDG accumulation and tumor metabolism in pancreatic ductal adenocarcinoma (PDAC).

Patients And Methods: A prognostic analysis of data from 131 patients with PDAC who underwent FDG-PET/CT before curative-intent pancreatic surgery was performed.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!