Clinical trials are the foundation of evidence-based medicine and their computerized support has been a recurring theme in medical informatics. One challenging aspect is the representation of eligibility criteria in a machine-readable format to automate the identification of suitable participants. In this study, we investigate the capabilities for expressing trial eligibility criteria via the search functionality specified in HL7 FHIR, an emerging standard for exchanging healthcare information electronically which also defines a set of operations for searching for health record data. Using a randomly sampled subset of 303 eligibility criteria from ClinicalTrials.gov yielded a 34 % success rate in representing them using the FHIR search semantics. While limitations are present, the FHIR search semantics are a viable tool for supporting preliminary trial eligibility assessment.
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Sci Data
December 2024
Amsterdam UMC location University of Amsterdam, Department of Medical Informatics, Amsterdam, 1105, AZ, The Netherlands.
Faced with heterogeneity of healthcare data, we propose a novel approach for harmonizing data elements (i.e., attributes) across health data standards.
View Article and Find Full Text PDFJMIR Med Inform
October 2024
Institute for Medical Informatics, University Clinic Rheinisch-Westfälische Technische Hochschule Aachen, Aachen, Germany.
Background: To advance research with clinical data, it is essential to make access to the available data as fast and easy as possible for researchers, which is especially challenging for data from different source systems within and across institutions. Over the years, many research repositories and data standards have been created. One of these is the Fast Healthcare Interoperability Resources (FHIR) standard, used by the German Medical Informatics Initiative (MII) to harmonize and standardize data across university hospitals in Germany.
View Article and Find Full Text PDFStud Health Technol Inform
September 2024
While Fast Healthcare Interoperability Resources (FHIR) clinical terminology server enables quick and easy search and retrieval of coded medical data, it still has some drawbacks. When searching, any typographical errors, variations in word forms, or deviations in word sequence might lead to incorrect search outcomes. For retrieval, queries to the server must strictly follow the FHIR application programming interface format, which requires users to know the syntax and remember the attribute codes they wish to retrieve.
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August 2024
MOLIT Institute, Heilbronn, Germany.
Introduction: Trial recruitment is a crucial factor for precision oncology, potentially improving patient outcomes and generating new scientific evidence. To identify suitable, biomarker-based trials for patients' clinicians need to screen multiple clinical trial registries which lack support for modern trial designs and offer only limited options to filter for in- and exclusion criteria. Several registries provide trial information but are limited regarding factors like timeliness, quality of information and capability for semantic, terminology enhanced searching for aspects like specific inclusion criteria.
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August 2024
Department of Computer Science, Trier University of Applied Sciences, Trier, Germany.
Data sharing spaces for medical data are necessary to facilitate research. To make medical data available for research, a mechanism is preferable that not only provides data a researcher has legal access to, but also contributes to the investigation of their specific research hypothesis. We propose a three-party two-stage search algorithm initiated by a researcher on centrally stored but technically and organizationally separated data.
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