Biochemical analysis of human tRNA guanylyltransferase in mitochondrial tRNA maturation.

Biochem Biophys Res Commun

Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Sapporo, 062-8517, Japan; Graduate School of Life Science, Hokkaido University, Sapporo, 060-0810, Japan. Electronic address:

Published: September 2018

Mitochondria contain their own protein synthesis machinery, which includes mitochondrial tRNA maturation. It has been suggested that mammalian mitochondrial tRNA (mtRNA) is matured by post-transcriptional addition of guanosine at the -1 position (G), which serves as an identity element for mitochondrial histidyl-tRNA synthetase. However, the exact maturation process of mammalian mtRNA remains unclear. In cytoplasmic tRNA (ctRNA) maturation, tRNA guanylyltransferase (Thg1) adds a GTP onto the 5'-terminal of ctRNA and then removes the 5'-pyrophosphate to yield the mature 5'-monophospholylated G-ctRNA (pG-ctRNA). Although mammalian Thg1 is localized to both the cytoplasm and mitochondria, it remains unclear whether mammalian Thg1 plays a role in mtRNA maturation in mitochondria. Here, we demonstrated that human Thg1 (hThg1) catalyzes the G addition reaction for both human ctRNA and mtRNA through recognition of the anticodon. While hThg1 catalyzed consecutive GTP additions to mtRNAin vitro, it did not exhibit any activity toward mature pG-mtRNA. We further found that hThg1 could add a GMP directly to the 5'-terminal of mtRNA in a template-dependent manner, but fungal Thg1 could not. Therefore, we hypothesized that acceleration of the pyrophosphate removal activity before or after the G addition reaction is a key feature of hThg1 for maintaining a normal 5'-terminal of mtRNA in human mitochondria. This study provided a new insight into the differences between tRNA maturation in the cytoplasm and mitochondria of humans.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.bbrc.2018.07.150DOI Listing

Publication Analysis

Top Keywords

mitochondrial trna
12
trna maturation
12
trna guanylyltransferase
8
maturation mitochondria
8
remains unclear
8
mammalian thg1
8
cytoplasm mitochondria
8
addition reaction
8
5'-terminal mtrna
8
trna
7

Similar Publications

Phylogenetic and Comparative Genomics Study of Based on Mitochondrial Genomes.

Insects

December 2024

Xinjiang Laboratory of Special Environmental Microbiology, Institute of Microbiology, Xinjiang Academy of Agricultural Sciences, Urumqi 830091, China.

Camel bot fly () larvae cause myiasis in domesticated and wild camels, resulting in significant economic losses to the camel industry and posing a serious global public health concern. To date, only one mitochondrial genome (mitogenome) of isolated from the Alxa Bactrian camel has been reported. Herein, was isolated from the Junggar Bactrian camel to assemble a complete circular mitogenome with a length of 16,552 bp encoding 13 protein-coding genes, 22 tRNA genes, and two rRNA genes.

View Article and Find Full Text PDF

Decoding Codon Bias: The Role of tRNA Modifications in Tissue-Specific Translation.

Int J Mol Sci

January 2025

Department of Neurosurgical Engineering and Translational Neuroscience, Graduate School of Medicine, Tohoku University, Sendai 980-8575, Japan.

The tRNA epitranscriptome has been recognized as an important player in mRNA translation regulation. Our knowledge of the role of the tRNA epitranscriptome in fine-tuning translation via codon decoding at tissue or cell levels remains incomplete. We analyzed tRNA expression and modifications as well as codon optimality across seven mouse tissues.

View Article and Find Full Text PDF

is a fully mycoheterotrophic orchid that lacks both leaves and roots, belonging to the genus in the subtribe Calypsoinae. In this study, we assembled and annotated its mitochondrial genome (397,867 bp, GC content: 42.70%), identifying 55 genes, including 37 protein-coding genes (PCGs), 16 tRNAs, and 2 rRNAs, and conducted analyses of relative synonymous codon usage (RSCU), repeat sequences, horizontal gene transfers (HGTs), and gene selective pressure (dN/dS).

View Article and Find Full Text PDF

Mitochondrial Genome Insights into Evolution and Gene Regulation in .

Int J Mol Sci

January 2025

College of Life Sciences, Capital Normal University, Haidian District, Beijing 100048, China.

As a globally distributed perennial Gramineae, can adapt to harsh ecological environments and has significant economic and environmental values. Here, we performed a complete assembly and annotation of the mitogenome of using genomic data from the PacBio and BGI platforms. The mitogenome is a multibranched structure of 501,134 bp, divided into two circular chromosomes of 325,493 bp and 175,641 bp, respectively.

View Article and Find Full Text PDF

Complete Mitochondrial Genome of King Threadfin, (Günther, 1867): Genome Characterization and Phylogenetic Analysis.

Genes (Basel)

January 2025

Key Laboratory of South China Sea Fishery Resources Exploitation and Utilization, Ministry of Agriculture and Rural Affairs, South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Guangzhou 510300, China.

Background: (Günther; 1867) is a member of the family Polynemidae. The placement of Polynemidae among teleosts has varied over the years.

Methods: Therefore, in this study, we sequenced the complete mitochondrial genome of , analyzed the characterization of the mitochondrial genome, and investigated the phylogenetic relationships of Polynemidae.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!