The Notch Interactome: Complexity in Signaling Circuitry.

Adv Exp Med Biol

Department of Cell Biology, Harvard Medical School, Boston, MA, USA.

Published: February 2019

The Notch pathway controls a very broad spectrum of cell fates in metazoans during development, influencing proliferation, differentiation and cell death. Given its central role in normal development and homeostasis, misregulation of Notch signals can lead to various disorders including cancer. How the Notch pathway mediates such pleiotropic and differential effects is of fundamental importance. It is becoming increasingly clear through a number of large-scale genetic and proteomic studies that Notch interacts with a staggeringly large number of other genes and pathways in a context-dependent, complex, and highly regulated network, which determines the ultimate biological outcome. How best to interpret and analyze the continuously increasing wealth of data on Notch interactors remains a challenge. Here we review the current state of genetic and proteomic data related to the Notch interactome.

Download full-text PDF

Source
http://dx.doi.org/10.1007/978-3-319-89512-3_7DOI Listing

Publication Analysis

Top Keywords

notch interactome
8
notch pathway
8
genetic proteomic
8
data notch
8
notch
7
interactome complexity
4
complexity signaling
4
signaling circuitry
4
circuitry notch
4
pathway controls
4

Similar Publications

A tri-protein complex containing NICD, RBPj and MAML1 binds DNA as monomer or as cooperative dimers to regulate transcription. Mice expressing Notch dimerization-deficient alleles (NDD) of Notch1 and Notch2 are sensitized to environmental insults but otherwise develop and age normally. Transcriptomic analysis of colonic spheroids uncovered no evidence of dimer-dependent target gene miss-regulation, confirmed impaired stem cell maintenance in-vitro, and discovered an elevated signature of epithelial innate immune response to symbionts, a likely underlying cause for heightened sensitivity in NDD mice.

View Article and Find Full Text PDF

SRCAP is involved in porcine reproductive and respiratory syndrome virus activated Notch signaling pathway.

J Virol

December 2024

Department of Fundamental Veterinary Medicine, College of Veterinary Medicine, Shandong Agricultural University, Tai'an, Shandong, China.

Article Synopsis
  • Porcine reproductive and respiratory syndrome (PRRS) caused by PRRSV leads to significant economic losses in the pork industry, and the non-structural protein 4 (Nsp4) plays a crucial role in the virus's infection process.
  • Using label-free quantitative proteomics, researchers identified SRCAP as a key interacting protein that enhances PRRSV infection by activating non-canonical Notch signaling through specific interaction sites on both proteins.
  • Blocking the Notch signaling pathway presents a promising strategy for developing new antiviral therapies against PRRSV infection.
View Article and Find Full Text PDF

Background: The prognostic impact of genetic mutations for patients who undergo cytoreductive surgery (CRS) with hyperthermic intraperitoneal chemotherapy (HIPEC) of colorectal origin (CRC) is not well defined.

Objective: We aimed to describe the genetic classifications in an unsupervised fashion, and the outcomes of this patient population.

Methods: A retrospective, bi-institutional study was performed on patients who underwent CRS-HIPEC with targeted mutation data with a median follow-up time of 61 months.

View Article and Find Full Text PDF

We describe a next-generation Drosophila protein interaction map-"DPIM2"-established from affinity purification-mass spectrometry of 5,805 baits, covering the largest fraction of the Drosophila proteome. The network contains 32,668 interactions among 3,644 proteins, organized into 632 clusters representing putative functional modules. Our analysis expands the pool of known protein interactions in Drosophila, provides annotation for poorly studied genes, and postulates previously undescribed protein interaction relationships.

View Article and Find Full Text PDF

Unlabelled: Cancer immunotherapy has revolutionized the treatment of lung adenocarcinoma (LUAD); however, a significant proportion of patients do not respond. Recent transcriptomic studies to understand determinants of immunotherapy response have pinpointed stromal-mediated resistance mechanisms. To gain a better understanding of stromal biology at the cellular and molecular level in LUAD, we performed single-cell RNA sequencing of 256,379 cells, including 13,857 mesenchymal cells, from 9 treatment-naïve patients.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!