Background: 3D reconstruction algorithms are of fundamental importance for augmented reality applications in computer-assisted surgery. However, few datasets of endoscopic stereo images with associated 3D surface references are currently openly available, preventing the proper validation of such algorithms. This work presents a new and rich dataset of endoscopic stereo images (EndoAbS dataset).
Methods: The dataset includes (i) endoscopic stereo images of phantom abdominal organs, (ii) a 3D organ surface reference (RF) generated with a laser scanner and (iii) camera calibration parameters. A detailed description of the generation of the phantom and the camera-laser calibration method is also provided.
Results: An estimation of the overall error in creation of the dataset is reported (camera-laser calibration error 0.43 mm) and the performance of a 3D reconstruction algorithm is evaluated using EndoAbS, resulting in an accuracy error in accordance with state-of-the-art results (<2 mm).
Conclusions: The EndoAbS dataset contributes to an increase the number and variety of openly available datasets of surgical stereo images, including a highly accurate RF and different surgical conditions.
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http://dx.doi.org/10.1002/rcs.1926 | DOI Listing |
J Biomed Opt
January 2025
The Johns Hopkins University, Department of Biomedical Engineering, Baltimore, Maryland, United States.
Significance: Laparoscopic surgery presents challenges in localizing oncological margins due to poor contrast between healthy and malignant tissues. Optical properties can uniquely identify various tissue types and disease states with high sensitivity and specificity, making it a promising tool for surgical guidance. Although spatial frequency domain imaging (SFDI) effectively measures quantitative optical properties, its deployment in laparoscopy is challenging due to the constrained imaging environment.
View Article and Find Full Text PDFIEEE Trans Med Imaging
November 2024
Visualizing surgical scenes is crucial for revealing internal anatomical structures during minimally invasive procedures. Novel View Synthesis is a vital technique that offers geometry and appearance reconstruction, enhancing understanding, planning, and decision-making in surgical scenes. Despite the impressive achievements of Neural Radiance Field (NeRF), its direct application to surgical scenes produces unsatisfying results due to two challenges: endoscopic sparse views and significant photometric inconsistencies.
View Article and Find Full Text PDFSensors (Basel)
July 2024
School of Mechanical Engineering, University of Shanghai for Science and Technology, Shanghai 200093, China.
In the field of endoscopic imaging, challenges such as low resolution, complex textures, and blurred edges often degrade the quality of 3D reconstructed models. To address these issues, this study introduces an innovative endoscopic image super-resolution and 3D reconstruction technique named Omni-Directional Focus and Scale Resolution (OmDF-SR). This method integrates an Omnidirectional Self-Attention (OSA) mechanism, an Omnidirectional Scale Aggregation Group (OSAG), a Dual-stream Adaptive Focus Mechanism (DAFM), and a Dynamic Edge Adjustment Framework (DEAF) to enhance the accuracy and efficiency of super-resolution processing.
View Article and Find Full Text PDFIEEE J Biomed Health Inform
July 2024
Endoscopy holds a pivotal role in the early detection and treatment of diverse diseases, with artificial intelligence (AI)-assisted methods increasingly gaining prominence in disease screening. Among them, the depth estimation from endoscopic sequences is crucial for a spectrum of AI-assisted surgical techniques. However, the development of endoscopic depth estimation algorithms presents a formidable challenge due to the unique environmental intricacies and constraints within the dataset.
View Article and Find Full Text PDFInt J Comput Assist Radiol Surg
July 2024
EnCoV, Institut Pascal, UMR6602 CNRS, UCA, Clermont-Ferrand University Hospital, Clermont-Ferrand, France.
Purpose: A stereoscopic surgical video stream consists of left-right image pairs provided by a stereo endoscope. While the surgical display shows these image pairs synchronised, most capture cards cause de-synchronisation. This means that the paired left and right images may not correspond once used in downstream tasks such as stereo depth computation.
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