An optimized implementation of the local natural orbital (LNO) coupled-cluster (CC) with single-, double-, and perturbative triple excitations [LNO-CCSD(T)] method is presented. The integral-direct, in-core, highly efficient domain construction technique of our local second-order Møller-Plesset (LMP2) scheme is extended to the CC level. The resulting scheme, which is also suitable for general-order LNO-CC calculations, inherits the beneficial properties of the LMP2 approach, such as the asymptotically linear-scaling operation count, the asymptotically constant data storage requirement, and the completely independent domain calculations. In addition to integrating our recent redundancy-free LMP2 and Laplace-transformed (T) algorithms with the LNO-CCSD(T) code, the memory demand, the domain and LNO construction, the auxiliary basis compression, and the previously rate-determining two-external integral transformation have been significantly improved. The accuracy of all of the approximations is carefully examined on medium-sized to large systems to determine reasonably tight default truncation thresholds. Our benchmark calculations, performed on molecules of up to 63 atoms, show that the optimized method with the default settings provides average correlation and reaction energy errors of less than 0.07% and 0.34 kcal/mol, respectively, compared to the canonical CCSD(T) reference. The efficiency of the present LNO-CCSD(T) implementation is demonstrated on realistic, three-dimensional examples. Using the new code, an LNO-CCSD(T) correlation energy calculation with a triple-ζ basis set is feasible on a single processor for a protein molecule including 2380 atoms and more than 44000 atomic orbitals.
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http://dx.doi.org/10.1021/acs.jctc.8b00442 | DOI Listing |
BMC Cancer
January 2025
Department of Radiation Oncology, First Affiliated Hospital of Kunming Medical University, 295 Xichang Road, Kunming, 650032, P. R. China.
Introduction: The core objective of this study was to precisely locate metastatic lymph nodes, identify potential areas in nasopharyngeal carcinoma patients that may not require radiotherapy, and propose a hypothesis for reduced target volume radiotherapy on the basis of these findings. Ultimately, we reassessed the differences in dosimetry of organs at risk (OARs) between reduced target volume (reduced CTV2) radiotherapy and standard radiotherapy.
Methods And Materials: A total of 209 patients participated in the study.
Sci Rep
January 2025
Department of Biomedical Engineering, School of Life Science and Technology, Changchun University of Science and Technology, Changchun, 130022, China.
The cervical cell classification technique can determine the degree of cellular abnormality and pathological condition, which can help doctors to detect the risk of cervical cancer at an early stage and improve the cure and survival rates of cervical cancer patients. Addressing the issue of low accuracy in cervical cell classification, a deep convolutional neural network A2SDNet121 is proposed. A2SDNet121 takes DenseNet121 as the backbone network.
View Article and Find Full Text PDFNat Commun
January 2025
Center for High Pressure Science, State Key Laboratory of Metastable Materials Science and Technology, Yanshan University, Qinhuangdao, 066004, China.
Hydrous aluminosilicates are important deep water-carriers in sediments subducting into the deep mantle. To date, it remains enigmatic how hydrous aluminosilicates withstand extremely high temperatures in the mantle transition zone. Here we systematically investigate the crystal structures and chemical compositions of typical hydrous aluminosilicates using single-crystal X-ray diffraction, electron probe microanalyzer, and nanoscale secondary ion mass spectrometry.
View Article and Find Full Text PDFSci Bull (Beijing)
January 2025
Department of Mechanical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea; Department of Chemical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea; Department of Electrical Engineering, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea; POSCO-POSTECH-RIST Convergence Research Center for Flat Optics and Metaphotonics, Pohang 37673, Republic of Korea. Electronic address:
Band topology has emerged as a novel tool for material design across various domains, including photonic and phononic systems, and metamaterials. A prominent model for band topology is the Su-Schrieffer-Heeger (SSH) chain, which reveals topological in-gap states within Bragg-type gaps (BG) formed by periodic modification. Apart from classical BGs, another mechanism for bandgap formation in metamaterials involves strong coupling between local resonances and propagating waves, resulting in a local resonance-induced bandgap (LRG).
View Article and Find Full Text PDFBMJ Case Rep
January 2025
Pathology, Shri B.M. Patil Medical College Hospital and Research Centre, BLDE (Deemed to be University), Vijayapura, Karnataka, India.
Myofibroblastoma is a rare mesenchymal tumour known for its benign nature but complex diagnostic pathway. A woman in her 40s presented with a painless breast mass, initially reported as a fibroadenoma on ultrasound mammography and as a benign to borderline phyllodes tumour on fine needle aspiration cytology. Contrast-enhanced CT was reported as carcinoma of the breast with Breast Imaging and Reporting Data System (BIRADS)-6.
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