Eukaryotic micro-plankton plays a key role in the marine biotic community and in maintaining the stability of the marine ecosystem. In order to determine the diversity and characteristics of eukaryotic micro-plankton in the Yellow Sea, Illumina high-throughput sequencing, based on gene markers of ITS, was conducted. An analysis of the relationship between community structure and environmental factors was conducted as well. The results are summarized in the following. ① Various of species of fungi, phytoplankton, and zooplankton were obtained by high-throughput sequencing technology; for OTUs, the order is fungi > phytoplankton > zooplankton, and for reads, the order is fungi > zooplankton > phytoplankton. ② In different waters, species abundance and diversity differed from each other. The Ace index and Chao1 index demonstrated an ordering of southern Yellow Sea > northern Yellow Sea > northern East Sea > Cold Water Mass; however, for the Simpson index and Shannon-Wiener index, the tendency followed the order of northern East Sea > northern Yellow Sea > southern Yellow Sea > Cold Water Mass. Species abundance and diversity in the Cold Water Mass were lowest. ③ The reads and OTUs of fungi, phytoplankton, and zooplankton increased as temperature rose. The reads and OTUs of fungi increased as salinity increased, while there was an opposite trend for phytoplankton and zooplankton. Latitude was another significant factor. In the range of 30° to 40° north latitude, the Shannon-Wiener index for fungi and zooplankton indicated an increasing tendency with an increase in latitude, while the Shannon-Wiener index for phytoplankton showed an opposite trend. With a greater distance from the coast, the Shannon-Wiener index of fungi, phytoplankton and zooplankton was lower. This is the first study that amplifies the use ITS in the research of marine eukaryotic micro-plankton, giving an enriched understanding of eukaryotic micro-plankton. The feasibility of applying high-throughput sequencing technology in the sea is proven, and this will provide a reference for other researchers.
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http://dx.doi.org/10.13227/j.hjkx.201710055 | DOI Listing |
J Hazard Mater
January 2025
Guangdong Provincial Key Laboratory of Biotechnology for Plant Development, Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, College of Life Science, South China Normal University, West 55 of Zhongshan Avenue, Guangzhou 510631, China. Electronic address:
Domoic acid (DA), a well-known marine neurotoxin, is produced by toxic Pseudo-nitzschia species. However, the knowledge of DA in Chinese coastal waters remains limited, and the primary biological sources in these waters are still unknown. In this study, 200 surface phytoplankton samples were collected during summer and spring, covering the entire Chinese coastline.
View Article and Find Full Text PDFSci Total Environ
January 2025
Laoshan Laboratory, Qingdao 266237, China. Electronic address:
Seagrasses represent a significant class of marine foundation species, yet the distribution of seagrasses in the Yellow Sea and Bohai Sea remains uncertain, thereby impeding the efficacy of conservation and restoration practices. In this study, the spatial and temporal distribution pattern of seagrasses was simulated by the MaxEnt model based on the construction of marine environment and human activity datasets. The main controlling factors affecting seagrass potential distribution were analyzed, and the response of seagrass distribution to global change was clarified.
View Article and Find Full Text PDFPlants (Basel)
January 2025
Rongcheng Chudao Aquaculture Co., Ltd., Rongcheng 264312, China.
Low-salinity conditions are generally used in land-based cultivation to promote the germination and growth of L. and to improve the restoration effect of seagrass beds. Different salinity conditions lead to morphological and physiological differences.
View Article and Find Full Text PDFGenes (Basel)
January 2025
State Key Laboratory of Mariculture Biobreeding and Sustainable Goods, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao 266071, China.
Background/objectives: The Pacific abalone originated in cold waters and is an economically important aquaculture shellfish in China. Our goal was to clarify the current status of the genetic structure of Pacific abalone in China.
Methods: In this study, eighteen polymorphic EST-SSR loci were successfully developed based on the hemolymph transcriptome data of Pacific abalone, and thirteen highly polymorphic EST-SSR loci were selected for the genetic variation analysis of the six populations collected.
Genes (Basel)
December 2024
Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao 266071, China.
Background: Hypoxia triggers stress, leading to significant alterations in gene expression patterns, which in turn affect fish's growth and development. Real-time quantitative PCR (RT-qPCR) is a pivotal technique for assessing changes in gene expression. However, its accuracy is highly contingent upon the stable expression of reference genes.
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