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Data on genome sequencing, analysis and annotation of a pathogenic 062011msu. | LitMetric

AI Article Synopsis

Article Abstract

species 062011 msu is a harmful pathogenic strain responsible for causing abscessation in sheep and goat population studied by Mariappan et al. (2012) [1]. The organism specifically targets the female sheep and goat population and results in the reduction of milk and meat production. In the present study, we have performed the whole genome sequencing of the pathogenic isolate using the Ion Torrent sequencing platform and generated 458,944 raw reads with an average length of 198.2 bp. The genome sequence was assembled, annotated and analysed for the genetic islands, metabolic pathways, orthologous groups, virulence factors and antibiotic resistance genes associated with the pathogen. Simultaneously the 16S rRNA sequencing study and genome sequence comparison data confirmed that the strain belongs to the species and exhibits 99% sequence homo;logy with the genomes of ATCC 10987 and FRI-35. Hence, we have renamed the organism as 062011msu. The Whole Genome Shotgun (WGS) project has been deposited at DDBJ/ENA/GenBank under the accession NTMF00000000 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA404036(SAMN07629099)).

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5988026PMC
http://dx.doi.org/10.1016/j.dib.2017.12.054DOI Listing

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