Background: With the introduction of Flat Panel Detector technology, cone-beam CT (CBCT) has become a novel image modality, and widely applied in clinical practices. C-arm mounted CBCT has shown extra suitability in image guided interventional surgeries. During practice, how to acquire high resolution and high quality 3D images with the real time requirement of clinical applications remain challenging.
Methods: In this paper, we propose a GPU based accelerated method for fast C-arm CBCT 3D image reconstructions. A filtered back projection method is optimized and implemented with GPU parallel acceleration technique. A distributed system is designed to make full use of the image acquisition consumption to hide the reconstruction delay to further improve system performance.
Results: With the acceleration both in algorithm and system design, we show that our method significantly increases system efficiency. The optimized GPU accelerated FDK algorithm improves the reconstruction efficiency. The system performance is further enhanced with the proposed system design by 26% and reconstruction delay is accelerated by 2.1 times when 90 frames of projections are used. When the number of frames used increases to 120, the numbers are 39% and 3.3 times. We also show that when the projection acquisition consumption increases, the reconstruction acceleration rate increases significantly.
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http://dx.doi.org/10.1186/s12938-018-0506-4 | DOI Listing |
J Imaging Inform Med
January 2025
Department of Pathology, Sinopharm Tongmei General Hospital, Datong, 037003, Shanxi, China.
Whole slide imaging (WSI) has transformed diagnostic medicine, particularly in the field of cancer diagnosis and treatment. The use of deep learning algorithms for predicting WSIs has opened up new avenues for advanced medical diagnostics. Additionally, stain normalization can reduce the color and intensity variations present in WSI from different hospitals.
View Article and Find Full Text PDFHealthc Technol Lett
December 2024
Robotics and Control Laboratory, Department of Electrical and Computer Engineering The University of British Columbia Vancouver Canada.
The Segment Anything model (SAM) is a powerful vision foundation model that is revolutionizing the traditional paradigm of segmentation. Despite this, a reliance on prompting each frame and large computational cost limit its usage in robotically assisted surgery. Applications, such as augmented reality guidance, require little user intervention along with efficient inference to be usable clinically.
View Article and Find Full Text PDFPhys Med Biol
January 2025
CREATIS, INSA de Lyon, Bâtiment Blaise Pascal, 7 Avenue Jean Capelle, Villeurbanne, 69621 Cedex , FRANCE.
Compton cameras are imaging devices that may improve observation of sources of γ photons. We present CoReSi, a Compton Reconstruction and Simulation software implemented in Python and powered by PyTorch to leverage multi-threading and for easy interfacing with image processing and deep learning algorithms. The code is mainly dedicated to medical imaging and for near-field experiments where the images are reconstructed in 3D.
View Article and Find Full Text PDFMed Phys
January 2025
Department of Radiation Physics, The University of Texas MD Anderson Cancer Center, Houston, USA.
Purpose: In locations where the proton energy spectrum is broad, lineal energy spectrum-based proton biological effects models may be more accurate than dose-averaged linear energy transfer (LET) based models. However, the development of microdosimetric spectrum-based biological effects models is hampered by the extreme computational difficulty of calculating microdosimetric spectra. Given a precomputed library of lineal energy spectra for monoenergetic protons, a weighted summation can be performed which yields the lineal energy spectrum of an arbitrary polyenergetic beam.
View Article and Find Full Text PDFNeurocomputing (Amst)
January 2025
Department of Electrical and Computer Engineering, University of Maryland at College Park, 8223 Paint Branch Dr, College Park, MD, 20740, USA.
Inference using deep neural networks on mobile devices has been an active area of research in recent years. The design of a deep learning inference framework targeted for mobile devices needs to consider various factors, such as the limited computational capacity of the devices, low power budget, varied memory access methods, and I/O bus bandwidth governed by the underlying processor's architecture. Furthermore, integrating an inference framework with time-sensitive applications - such as games and video-based software to perform tasks like ray tracing denoising and video processing - introduces the need to minimize data movement between processors and increase data locality in the target processor.
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