The feasibility of using a polymerase chain reaction (PCR)-based label-free DNA sensor for the detection of Helicobacter pylori is investigated. In particular, H. pylori ureC gene, a specific H. pylori nucleic acid sequence, was selected as the target sequence. In the presence of ureC gene, the target DNA could be amplified to dsDNA with much higher detectable levels. After added the SYBR green I (SGI), the sensing system could show high fluorescence. Thus, the target DNA can be detected by monitoring the change of fluorescence intensity of sensing system. The clinical performance of this method was determined by comparing it with another conventional technique urea breath test (UBT). The result also showed good distinguishing ability between negative and positive patient, which was in good agreement with that obtained by the UBT. It suggests that the label-free fluorescence-based method is more suitable for infection confirmation test of H. pylori. This approach offers great potential for simple, sensitive and cost-effective identification of H. pylori infection.
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http://dx.doi.org/10.1002/bio.3493 | DOI Listing |
J Environ Manage
January 2025
Laboratory of Environmental Microbiology and Ecology (LEnME), Department of Life Science, National Institute of Technology, Rourkela, 769 008, Odisha, India. Electronic address:
Increasing industrial pollution and certain hazardous agricultural practices have led to the discharge of heavy toxic metals into the environment. Among different bioremediation techniques, biomineralization is the synthesis of biomineral crystals extracellularly or intracellularly. Several bacteria, such as Bacillus cereus, Pseudomonas stutzeri, Bacillus subtilis, and Lactobacillus sphaericus have been found to induce heavy metal precipitation and mineralization for bioremediation.
View Article and Find Full Text PDFHuan Jing Ke Xue
January 2025
State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China.
In this investigation, the influence of organic amendment on the structural and functional dynamics of soil microbial communities and its effect on rice productivity were examined. Five fertilization treatments from a 40-year field experiment were selected: no fertilizer (CK), inorganic NPK fertilizer (NPK), inorganic NPK combined with green manure (NG), inorganic NPK combined with green manure and pig manure (NGM), and inorganic NPK combined with green manure and rice straw (NGS). The findings revealed that the organic amendment enhanced the soil organic carbon (SOC), total nitrogen (TN), and total phosphorus (TP) levels, alongside an increase in rice yield; notably, the most significant improvements were observed with the NGM treatment.
View Article and Find Full Text PDFIJID Reg
March 2025
Faculty of Medical Sciences, The University of the West Indies, St. Augustine, Trinidad and Tobago.
Objectives: To delineate and understand the genetic variations among strains from Trinidad and Tobago associated with gastric diseases.
Methods: One hundred (n = 100) patients who routinely presented with clinical features suggestive of peptic disease were enrolled in the study and underwent gastroscopy procedures. Biopsy specimens were analyzed using serological and molecular methods.
J Hazard Mater
December 2024
School of Environmental Science and Engineering, Southwest Jiaotong University, Chengdu 611700, China. Electronic address:
Sci Total Environ
December 2024
The Research Center of Soil and Water Conservation and Ecological Environment, Chinese Academy of Sciences and Ministry of Education, Yangling, Shaanxi 712100, China; Institute of Soil and Water Conservation, Chinese Academy of Sciences and Ministry of Water Resources, Yangling, Shaanxi 712100, China; State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Institute of Soil and Water Conservation, Northwest A&F University, Yangling, Shaanxi 712100, China. Electronic address:
Land degradation due to salinization threatens ecosystem health. Phytoremediation, facilitated by functional microorganisms, has gained attention for improving saline-alkali soils. However, the relationship between the functional potential of rhizosphere microbes involved in multi-element cycling and soil nutrient pools remain unclear.
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