Genome Sequencing and Analysis of the Peanut B-Genome Progenitor ().

Front Plant Sci

South China Peanut Sub-Center of National Center of Oilseed Crops Improvement, Guangdong Provincial Key Laboratory of Crop Genetic Improvement, Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, China.

Published: May 2018

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Article Abstract

Peanut ( L.), an important leguminous crop, is widely cultivated in tropical and subtropical regions. Peanut is an allotetraploid, having A and B subgenomes that maybe have originated in its diploid progenitors (A-genome) and (B-genome), respectively. We previously sequenced the former and here present the draft genome of the latter, expanding our knowledge of the unique biology of . The assembled genome of is ~1.39 Gb with 39,704 predicted protein-encoding genes. A gene family analysis revealed that the FAR1 family may be involved in regulating peanut special fruit development. Genomic evolutionary analyses estimated that the two progenitors diverged ~3.3 million years ago and suggested that experienced a whole-genome duplication event after the divergence of . We identified a set of disease resistance-related genes and candidate genes for biological nitrogen fixation. In particular, two and four homologous genes that may be involved in the regulation of nodule development were obtained from and , respectively. We outline a comprehensive network involved in drought adaptation. Additionally, we analyzed the metabolic pathways involved in oil biosynthesis and found genes related to fatty acid and triacylglycerol synthesis. Importantly, three new homologous genes were identified from and one was completely homologous at the amino acid level with FAD2 from . The availability of the and genomic assemblies will advance our knowledge of the peanut genome.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5943715PMC
http://dx.doi.org/10.3389/fpls.2018.00604DOI Listing

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