High-resolution melting PCR analysis for rapid genotyping of Burkholderia mallei.

Infect Genet Evol

Paris-Est University, ANSES, Laboratory for Animal Health, Bacterial Zoonosis Unit, European Union Reference Laboratory for Equine Diseases/Glanders, Maisons-Alfort, France. Electronic address:

Published: September 2018

Burkholderia (B.) mallei is the causative agent of glanders. A previous work conducted on single-nucleotide polymorphisms (SNP) extracted from the whole genome sequences of 45 B. mallei isolates identified 3 lineages for this species. In this study, we designed a high-resolution melting (HRM) method for the screening of 15 phylogenetically informative SNPs within the genome of B. mallei that subtype the species into 3 lineages and 12 branches/sub-branches/groups. The present results demonstrate that SNP-based genotyping represent an interesting approach for the molecular epidemiology analysis of B. mallei.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.meegid.2018.05.004DOI Listing

Publication Analysis

Top Keywords

high-resolution melting
8
burkholderia mallei
8
mallei
5
melting pcr
4
pcr analysis
4
analysis rapid
4
rapid genotyping
4
genotyping burkholderia
4
mallei burkholderia
4
mallei causative
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!