Manipulation of Ploidy in Caenorhabditis elegans.

J Vis Exp

Brooklyn College, Biology Department, City University of New York; The Graduate Center, Biology Department, City University of New York; Advanced Science Research Center, City University of New York;

Published: March 2018

Mechanisms that involve whole genome polyploidy play important roles in development and evolution; also, an abnormal generation of tetraploid cells has been associated with both the progression of cancer and the development of drug resistance. Until now, it has not been feasible to easily manipulate the ploidy of a multicellular animal without generating mostly sterile progeny. Presented here is a simple and rapid protocol for generating tetraploid Caenorhabditis elegans animals from any diploid strain. This method allows the user to create a bias in chromosome segregation during meiosis, ultimately increasing ploidy in C. elegans. This strategy relies on the transient reduction of expression of the rec-8 gene to generate diploid gametes. A rec-8 mutant produces diploid gametes that can potentially produce tetraploids upon fertilization. This tractable scheme has been used to generate tetraploid strains carrying mutations and chromosome rearrangements to gain insight into chromosomal dynamics and interactions during pairing and synapsis in meiosis. This method is efficient for generating stable tetraploid strains without genetic markers, can be applied to any diploid strain, and can be used to derive triploid C. elegans. This straightforward method is useful for investigating other fundamental biological questions relevant to genome instability, gene dosage, biological scaling, extracellular signaling, adaptation to stress, development of resistance to drugs, and mechanisms of speciation.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5931776PMC
http://dx.doi.org/10.3791/57296DOI Listing

Publication Analysis

Top Keywords

caenorhabditis elegans
8
diploid strain
8
diploid gametes
8
tetraploid strains
8
manipulation ploidy
4
ploidy caenorhabditis
4
elegans
4
elegans mechanisms
4
mechanisms involve
4
involve genome
4

Similar Publications

Exploring the challenges of RNAi-based strategies for crop protection.

Adv Biotechnol (Singap)

July 2024

State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.

RNA silencing (or RNA interference, RNAi) initiated by double-stranded RNAs is a conserved mechanism for regulating gene expression in eukaryotes. RNAi-based crop protection strategies, including host-induced gene silencing (HIGS), spray-induced gene silencing (SIGS) and microbe-induced gene silencing (MIGS), have been successfully used against various pests and pathogens. Here, we highlight the challenges surrounding dsRNA design, large-scale production of dsRNA and dsRNA delivery systems.

View Article and Find Full Text PDF

Quick Oil Red O staining is a well established method to assay total lipid levels in , but the software to clean up and analyse the images is either laborious, expensive or both. We have developed a process that uses an existing protocol to stain the animals, followed by Magic Select in Paint3D to remove background and then a custom script in Biopython to quantify average pixel intensity animal. The software is free, accessible and relatively easy to use for undergraduate researchers.

View Article and Find Full Text PDF

The AWC neuron is important for attraction to 1-butanol in .

MicroPubl Biol

January 2025

Department of Neuroscience, Pomona College, Claremont, California, United States of America.

uses chemosensation to recognize a variety of odors, many of which are released by bacteria, the major food source of . Specific amphid sensory neurons are known to detect different odorants. Here we show that the AWC neuron detects the attractive odorant 1-butanol.

View Article and Find Full Text PDF

Controlins I-X, Resin Glycosides from the Seeds of and Their Biological Activities.

J Nat Prod

January 2025

School of Pharmacy, Nantong University, 9 Seyuan Road, Nantong 226019, People's Republic of China.

Ten new resin glycosides, controlins I-X (-), were isolated from the seeds of . Their structures were established by spectroscopic analysis as well as by chemical means. Compounds were identified as glycosidic acid methyl esters, considered as artifacts generated via transesterification with MeOH from natural resin glycosides.

View Article and Find Full Text PDF

Spherical harmonics texture extraction for versatile analysis of biological objects.

PLoS Comput Biol

January 2025

European Molecular Biology Laboratory, Cell Biology and Biophysics Unit, Heidelberg, Germany.

The characterization of phenotypes in cells or organisms from microscopy data largely depends on differences in the spatial distribution of image intensity. Multiple methods exist for quantifying the intensity distribution - or image texture - across objects in natural images. However, many of these texture extraction methods do not directly adapt to 3D microscopy data.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!