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Comprehensive machine learning analysis of behavior reveals a stable basal behavioral repertoire. | LitMetric

Comprehensive machine learning analysis of behavior reveals a stable basal behavioral repertoire.

Elife

NeuroTechnology Center, Department of Biological Sciences, Columbia University, New York, United States.

Published: March 2018

AI Article Synopsis

  • Animal behavior research has traditionally relied on subjective human observation, making automated identification and classification difficult.
  • A new automatic behavior analysis pipeline was created using machine learning to analyze footage of cnidarians, allowing the extraction of motion and shape features to classify behaviors and identify unannotated actions.
  • The study found consistent behavior statistics among individuals of the same species, suggesting that their fundamental behavioral repertoire is stable, possibly linked to early neural control mechanisms in their nervous systems.

Article Abstract

Animal behavior has been studied for centuries, but few efficient methods are available to automatically identify and classify it. Quantitative behavioral studies have been hindered by the subjective and imprecise nature of human observation, and the slow speed of annotating behavioral data. Here, we developed an automatic behavior analysis pipeline for the cnidarian using machine learning. We imaged freely behaving , extracted motion and shape features from the videos, and constructed a dictionary of visual features to classify pre-defined behaviors. We also identified unannotated behaviors with unsupervised methods. Using this analysis pipeline, we quantified 6 basic behaviors and found surprisingly similar behavior statistics across animals within the same species, regardless of experimental conditions. Our analysis indicates that the fundamental behavioral repertoire of is stable. This robustness could reflect a homeostatic neural control of "housekeeping" behaviors which could have been already present in the earliest nervous systems.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5922975PMC
http://dx.doi.org/10.7554/eLife.32605DOI Listing

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