Although the influence of microbial community assembly processes on aquatic ecosystem function and biodiversity is well known, the processes that govern planktonic communities in human-impacted rivers remain largely unstudied. Here, we used multivariate statistics and a null model approach to test the hypothesis that environmental conditions and obstructed dispersal opportunities, dictate a deterministic community assembly for phytoplankton and bacterioplankton across contrasting hydrographic conditions in a subtropical mid-sized river (Jiulong River, southeast China). Variation partitioning analysis showed that the explanatory power of local environmental variables was larger than that of the spatial variables for both plankton communities during the dry season. During the wet season, phytoplankton community variation was mainly explained by local environmental variables, whereas the variance in bacterioplankton was explained by both environmental and spatial predictors. The null model based on Raup-Crick coefficients for both planktonic groups suggested little evidences of the stochastic processes involving dispersal and random distribution. Our results showed that hydrological change and landscape structure act together to cause divergence in communities along the river channel, thereby dictating a deterministic assembly and that selection exceeds dispersal limitation during the dry season. Therefore, to protect the ecological integrity of human-impacted rivers, watershed managers should not only consider local environmental conditions but also dispersal routes to account for the effect of regional species pool on local communities.
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http://dx.doi.org/10.1016/j.scitotenv.2018.02.210 | DOI Listing |
Eur J Protistol
January 2025
Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, PR China. Electronic address:
Diatom blooms are a global ecological perturbation that releases algal organic matter (AOM), significantly affecting coastal ecosystems by altering microbial community dynamics. AOM, derived from algal cell lysis, may serve as a nutrient source influencing protistan communities. However, the effects of AOM on protistan ecology, including the community structure and assembly processes, remain largely unexplored in coastal sediments.
View Article and Find Full Text PDFJ Hazard Mater
January 2025
School of Metallurgy and Environment, Central South University, Changsha 410083, PR China. Electronic address:
Although iron-doped hydroxyapatite (Fe-HAP) and its composites have been reported to immobilize arsenic (As), lead (Pb), and cadmium (Cd), its practical application is limited by the inefficient release of iron and phosphate. In this study, Ochrobactrum anthropic, a phosphate-solubilizing bacterium isolated from a lead-zinc smelting site, was employed to enhance multi-heavy metal immobilization in Fe-HAP-amended soils. O.
View Article and Find Full Text PDFMol Plant
January 2025
State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, School of Agriculture, Yunnan University, Kunming 650540, China; Southwest United Graduate School,Kunming 650500, China. Electronic address:
Potato is the world's most important nongrain crop. Here, we report that 29 genomes from Petota and Etuberosum sections were de novo assembled, and that 248 accessions of wild potatoes, landraces and modern cultivars were re-sequenced at > 25× depth to assess genetic diversity within the Petota section. Subsequently, a graph-based pangenome was constructed by using DM8.
View Article and Find Full Text PDFEnviron Microbiol
January 2025
Thermophile Research Unit, Te Aka Mātuatua, School of Science, Te Whare Wānanga o Waikato, University of Waikato, Hamilton, Aotearoa-New Zealand.
Active geothermal systems are relatively rare in Antarctica and represent metaphorical islands ideal to study microbial dispersal. In this study, we tested the macro-ecological concept that high dispersal rates result in communities being dominated by either habitat generalists or specialists by investigating the microbial communities on four geographically separated geothermal sites on three Antarctic volcanoes (Mts. Erebus, Melbourne, and Rittman).
View Article and Find Full Text PDFComput Biol Med
January 2025
Turku Bioscience Centre, University of Turku and Åbo Akademi University, FI-20520, Turku, Finland; Institute of Biomedicine, University of Turku, FI-20520, Turku, Finland. Electronic address:
With advances in sequencing technologies, the use of high-throughput sequencing to characterize microbial communities is becoming increasingly feasible. However, metagenomic assembly poses computational challenges in reconstructing genes and organisms from complex samples. To address this issue, we introduce a new concept called Adaptive Sequence Alignment (ASA) for analyzing metagenomic DNA sequence data.
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