Density functional theory (DFT) calculations combined with cluster models are performed at the B3LYP/6-311+G(d,p) level for investigating the solvent effects in Al(HO) water-exchange reactions. A "One-by-one" method is proposed to obtain the most representative number and arrangement of explicit HOs in the second hydration sphere. First, all the possible ways to locate one explicit HO in second sphere (N' = 1) based on the gas phase structure (N' = 0) are examined, and the optimal pathway (with the lowest energy barrier) for N' = 1 is determined. Next, more explicit HOs are added one by one until the inner-sphere is fully hydrogen bonded. Finally, the optimal pathways with N' = 0-7 are obtained. The structural and energetic parameters as well as the lifetimes of the transition states are compared with the results obtained with the "Independent-minimum" method and the "Independent-average" method, and all three methods show that the pathway with N' = 6 may be representative. Our results give a new idea for finding the representative pathway for water-exchange reactions in other hydrated metal ion systems.
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ACS Omega
November 2024
Suzhou Keyiqian Precision Equipment Co., Ltd, Suzhou 215163, China.
Visualizing and quantifying fluid distribution during spontaneous imbibition at the nanomicro scale is vital for understanding microfluid flow and dynamic wettability in coalbed methane (CBM) reservoirs, which could serve as a fundamental basis for optimizing the parameters of the hydraulic fracturing process. In this study, fluid distribution and flow behavior can be acquired by combining nuclear magnetic resonance (NMR) and in situ X-ray microcomputed tomography (μ-CT) technologies. Meanwhile, spontaneous imbibition stages were studied to analyze gas-water exchange efficiency.
View Article and Find Full Text PDFNat Commun
October 2024
Department of Earth and Space Science, Osaka University, Toyonaka, 560-0043, Japan.
Seismological observations indicate the presence of chemical heterogeneities at the lowermost mantle, just above the core-mantle boundary (CMB), sparking debate over their origins. A plausible explanation for the enigmatic seismic wave velocities observed in ultra-low-velocity zones (ULVZs) is the process of iron enrichment from the core to the silicate mantle. However, traditional models based on diffusion of atoms and penetration of molten iron fail to account for the significant iron enrichment observed in ULVZs.
View Article and Find Full Text PDFChemosphere
September 2024
Department of Environmental Engineering, Faculty of Engineering, Bursa Uludag University, 16059, Nilufer/Bursa, Turkey. Electronic address:
Polychlorinated dibenzo-p-dioxins (PCDDs) and polychlorinated dibenzofurans (PCDFs) cause significant environmental concerns. Atmospheric PCDD/Fs permeate water bodies and other ecosystems through wet and dry deposition. In an urban site, dry deposition flux samples of gaseous phase PCDD/Fs were collected by a water surface sampler (WSS) operated between June 2022 and June 2023.
View Article and Find Full Text PDFThe phenomenon of active trans-membrane water cycling (AWC) has emerged in little over a decade. Here, we consider HO transport across cell membranes from the origins of its study. Historically, trans-membrane water transport processes were classified into: A) compensating bidirectional fluxes (""), and B) unidirectional flux ("") categories.
View Article and Find Full Text PDFPhotosynth Res
December 2024
Molecular Biomimetics, Department of Chemistry - Ångström Laboratory, 75120, Uppsala, Sweden.
Water oxidation by photosystem II (PSII) sustains most life on Earth, but the molecular mechanism of this unique process remains controversial. The ongoing identification of the binding sites and modes of the two water-derived substrate oxygens ('substrate waters') in the various intermediates (S states, i = 0, 1, 2, 3, 4) that the water-splitting tetra-manganese calcium penta-oxygen (MnCaO) cluster attains during the reaction cycle provides central information towards resolving the unique chemistry of biological water oxidation. Mass spectrometric measurements of single- and double-labeled dioxygen species after various incubation times of PSII with HO provide insight into the substrate binding modes and sites via determination of exchange rates.
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