Ferrochelatase π-helix: Implications from examining the role of the conserved π-helix glutamates in porphyrin metalation and product release.

Arch Biochem Biophys

Department of Molecular Medicine, Morsani College of Medicine, University of South Florida, Tampa, FL, 33612, USA. Electronic address:

Published: April 2018

Protoporphyrin ferrochelatase catalyzes the insertion of Fe into protoporphyrin IX to form heme. To determine whether a conserved, active site π-helix contributes to the translocation of the metal ion substrate to the ferrochelatase-bound porphyrin substrate, the invariant π-helix glutamates were replaced with amino acids with non-negatively charged side chains, and the kinetic mechanisms of the generated variants were examined. Analysis of yeast wild-type ferrochelatase-, E314Q- and E318Q-catalyzed reactions, under multi- and single-turnover conditions, demonstrated that the mutations of the π-helix glutamates hindered both protoporphyrin metalation and release of the metalated porphyrin, by slowing each step by approximately 30-50%. Protoporphyrin metalation occurred with an apparent pK of 7.3 ± 0.1, which was assigned to binding of Fe by deprotonated Glu-314 and Glu-314-assisted Fe insertion into the porphyrin ring. We propose that unwinding of the π-helix concomitant with the adoption of a protein open conformation positions the deprotonated Glu-314 to bind Fe from the surface of the enzyme. Transition to the closed conformation, with π-helix winding, brings Glu-314-bound Fe to the active site for incorporation into protoporphyrin.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5880697PMC
http://dx.doi.org/10.1016/j.abb.2018.02.015DOI Listing

Publication Analysis

Top Keywords

π-helix glutamates
12
active site
8
protoporphyrin metalation
8
deprotonated glu-314
8
π-helix
6
protoporphyrin
5
ferrochelatase π-helix
4
π-helix implications
4
implications examining
4
examining role
4

Similar Publications

Wall shear stress modulates metabolic pathways in endothelial cells.

Metabolomics

January 2025

Laboratory of Applied Mass Spectrometry, Department of Cellular and Molecular Medicine, KU Leuven, Leuven, Belgium.

Introduction: Hemodynamic forces play a crucial role in modulating endothelial cell (EC) behavior, significantly influencing blood vessel responses. While traditional in vitro studies often explore ECs under static conditions, ECs are exposed to various hemodynamic forces in vivo. This study investigates how wall shear stress (WSS) influences EC metabolism, focusing on the interplay between WSS and key metabolic pathways.

View Article and Find Full Text PDF

Neuropathic pain, caused by nerve damage, greatly affects quality of life. Recent research proposes modulating brain activity, particularly through electrical stimulation of the insular cortex (IC), as a treatment option. This study aimed to understand how IC stimulation (ICS) affects pain modulation.

View Article and Find Full Text PDF

Background: The use of network pharmacology and blood metabolomics to study the pathogenesis of violent aggression in patients with schizophrenia and the related drug mechanisms of action provides new directions for reducing the risk of violent aggression and optimizing treatment plans.

Aim: To explore the metabolic regulatory mechanism of olanzapine in treating patients with schizophrenia with a moderate to high risk of violent aggression.

Methods: Metabolomic technology was used to screen differentially abundant metabolites in patients with schizophrenia with a moderate to high risk of violent aggression before and after olanzapine treatment, and the related metabolic pathways were identified.

View Article and Find Full Text PDF

Building electrode/electrolyte interphases in aqueous zinc batteries via self-polymerization of electrolyte additives.

Natl Sci Rev

January 2025

State Key Laboratory of Advanced Chemical Power Sources, Engineering Research Center of High-efficiency Energy Storage (Ministry of Education), College of Chemistry, Nankai University, Tianjin 300071, China.

Aqueous zinc batteries offer promising prospects for large-scale energy storage, yet their application is limited by undesired side reactions at the electrode/electrolyte interface. Here, we report a universal approach for the building of an electrode/electrolyte interphase (EEI) layer on both the cathode and the anode through the self-polymerization of electrolyte additives. In an exemplified Zn||VO·nHO cell, we reveal that the glutamate additive undergoes radical-initiated electro-polymerization on the cathode and polycondensation on the anode, yielding polyglutamic acid-dominated EEI layers on both electrodes.

View Article and Find Full Text PDF

Dihydroporphyrin iron (DH-Fe) is a novel plant growth regulator that plays significant roles in plant stress resistance. We found that is extremely sensitive to low temperature (LT) with a threshold of 25°C. To evaluate whether and how DH-Fe alleviates LT stress in , different DH-Fe concentrations (0, 10, 20, and 40 μg·L) were applied to estimate its effects on C and N metabolism and antioxidative capacity in grown under 20°C.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!