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Ion Channel Sensing: Are Fluctuations the Crux of the Matter? | LitMetric

Ion Channel Sensing: Are Fluctuations the Crux of the Matter?

J Phys Chem Lett

Institute for Computational Molecular Science , Temple University, Philadelphia , Pennsylvania 19122 , United States.

Published: March 2018

AI Article Synopsis

  • TRPV1 is a nonselective cation channel that converts harmful stimuli into action potentials in peripheral nerves, activating at temperatures above 43 °C.
  • Molecular dynamics simulations reveal that the ability of TRPV1 to switch from a nonconductive to a conductive state is influenced by the hydrophobic nature of its pore and the polar characteristics of its molecular surface.
  • The hydration state of four nearby cavities is linked to the motion of a polar side-chain, which plays a crucial role in the activation process as the temperature rises.

Article Abstract

The nonselective cation channel TRPV1 is responsible for transducing noxious stimuli into action potentials propagating through peripheral nerves. It is activated by temperatures greater than 43 °C, while remaining completely nonconductive at temperatures lower than this threshold. The origin of this sharp response, which makes TRPV1 a biological temperature sensor, is not understood. Here we used molecular dynamics simulations and free energy calculations to characterize the molecular determinants of the transition between nonconductive and conductive states. We found that hydration of the pore and thus ion permeation depends critically on the polar character of its molecular surface: in this narrow hydrophobic enclosure, the motion of a polar side-chain is sufficient to stabilize either the dry or wet state. The conformation of this side-chain is in turn coupled to the hydration state of four peripheral cavities, which undergo a dewetting transition at the activation temperature.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6310152PMC
http://dx.doi.org/10.1021/acs.jpclett.7b03396DOI Listing

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