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Draft genome sequence of strain LK1, a phytohormone producing bacterium. | LitMetric

Draft genome sequence of strain LK1, a phytohormone producing bacterium.

3 Biotech

1College of Life Sciences and Agronomy, Zhoukou Normal University, Room 407, Life Science Building, East Wenchang Road, Chuanhui District, Zhoukou, 466001 China.

Published: February 2018

A high-quality draft genome sequence of a multi-antibiotic resistant strain, strain LK1 isolated from the rhizosphere of is described. Strain LK1 produced several types of phytohormones, which included Indole-3-acetic acid (IAA) and Zeatin. Phylogenetic analysis of the gene of strain LK1 showed a close relationship to and (99% gene sequence similarity). The genome size of strain LK1 was estimated to be 7.16 Mb that consisted of 82 contigs contained in 49 scaffolds. The G + C content of the genome was 45.63% and it encoded 6499 genes, 115 pseudo genes, 8 rRNAs, 33 tRNAs, and 4 ncRNAs, based on the Prokaryotic Genome Annotation Pipeline (PGAP). Further analysis of the genome of strain LK1 identified 16 genes encoding monooxygenase and six genes encoding cytochrome P450, which may be potentially involved in zeatin biosynthesis. The draft whole genome sequence and annotation of strain LK1 has been deposited at DDBJ/EMBL/GenBank under the accession number (PEII00000000).

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5790742PMC
http://dx.doi.org/10.1007/s13205-017-1042-9DOI Listing

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