H, C and N NMR assignments of cyclophilin LRT2 (OsCYP2) from rice.

Biomol NMR Assign

Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY, 14853, USA.

Published: April 2018

Cyclophilins are enzymes that catalyze the isomerization of a prolyl-peptide bond and are found in both prokaryotes and eukaryotes. LRT2 (also known as OsCYP2) is a cyclophilin in rice (Oryza sativa), that has importance in lateral root development and stress tolerance. LRT2 is 172 amino acids long and has a molecular weight of 18.3 kDa. Here, we report the backbone and sidechain resonance assignments of H, C, N in the LRT2 protein using several 2D and 3D heteronuclear NMR experiments at pH 6.7 and 298 K. Our chemical shift data analysis predicts a secondary structure like the cytosolic wheat cyclophilin TaCypA-1 with 87.7% sequence identity. These assignments will be useful for further analysis in the NMR studies for function and structure of this enzyme.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5944331PMC
http://dx.doi.org/10.1007/s12104-018-9803-xDOI Listing

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