Draft genome sequence of 2A-2B strain: a rhizospheric inhabitant of (Torr.) Torr, with antifungal activity against root rot causing phytopathogens.

Stand Genomic Sci

Laboratorio Biología Integrativa de Plantas y Microorganismos, Unidad Académica de Ciencias Biológicas, Universidad Autónoma de Zacatecas, Av. Preparatoria s/n, Col. Agronómica, Zac. CP, -98067 Zacatecas, Mexico.

Published: December 2017

A strain from the rhizosphere of (Torr.) Torr, a grass in central-north México, was isolated during a biocontrol of phytopathogens scrutiny study. The 2A-2B strain exhibited at least 60% of growth inhibition of virulent isolates of phytopathogens causing root rot. These phytopathogens include , , and . Furthermore, the 2A-2B strain is an indolacetic acid producer, and a plant inducer of PR1, which is an induced systemic resistance related gene in chili pepper plantlets. Whole genome sequencing was performed to generate a draft genome assembly of 3.953 MB with 46.36% of GC content, and a N50 of 294,737. The genome contains 3713 protein coding genes and 89 RNA genes. Moreover, comparative genome analysis revealed that the 2A-2B strain had the greatest identity (98.4%) with

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5717847PMC
http://dx.doi.org/10.1186/s40793-017-0289-4DOI Listing

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