Kα high-energy-resolution fluorescence detected X-ray absorption spectroscopy (HERFD XAS) provides a powerful tool for overcoming the limitations of conventional XAS to identify the electronic structure and coordination environment of metalloprotein active sites. Herein, Fe Kα HERFD XAS is applied to the diiron active site of soluble methane monooxygenase (sMMO) and to a series of high-valent diiron model complexes, including diamond-core [Fe(μ-O)(L)](ClO)] (3) and open-core [(O═Fe-O-Fe(OH)(L)](ClO) (4) models (where, L = tris(3,5-dimethyl-4-methoxypyridyl-2-methyl)amine) (TPA*)). Pronounced differences in the HERFD XAS pre-edge energies and intensities are observed for the open versus closed FeO cores in the model compounds. These differences are reproduced by time-dependent density functional theory (TDDFT) calculations and allow for the pre-edge energies and intensity to be directly correlated with the local active site geometric and electronic structure. A comparison of the model complex HERFD XAS data to that of MMOH (the key intermediate in methane oxidation) is supportive of an open-core structure. Specifically, the large pre-edge area observed for MMOH may be rationalized by invoking an open-core structure with a terminal Fe═O motif, though further modulations of the core structure due to the protein environment cannot be ruled out. The present study thus motivates the need for additional experimental and theoretical studies to unambiguously assess the active site conformation of MMOH.
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http://dx.doi.org/10.1021/jacs.7b09560 | DOI Listing |
Phys Rev Lett
November 2024
Department of Interface Science, Fritz-Haber Institute of the Max Planck Society, 14195 Berlin, Germany.
Nickel and nitrogen co-doped carbon (Ni-N-C) catalysts are attracting attention due to their exceptionally high performance in the electrocatalytic reduction of CO_{2}(CO_{2}RR) to CO. However, the direct experimental insight into the working mechanism of these catalysts is missing, hindering our fundamental understanding and their further improvement. This work sheds light on the nature of adsorbates forming under CO_{2}RR at singly dispersed Ni sites.
View Article and Find Full Text PDFJ Am Chem Soc
December 2024
Institute for Nanostructure and Solid-State Physics, Center for Hybrid Nanostructures, University of Hamburg, Luruper Chaussee 149, Hamburg 22761, Germany.
Chemistry
August 2024
The Rossendorf Beamline at ESRF, The European Synchrotron, CS40220, 38043, Grenoble Cedex 9, France.
Historically, cerium has been attractive for pharmaceutical and industrial applications. The cerium atom has the unique ability to cycle between two chemical states (Ce(III) and Ce(IV)) and drastically adjust its electronic configuration: [Xe] 4f5d6s in response to a chemical reaction. Understanding how electrons drive chemical reactions is an important topic.
View Article and Find Full Text PDFInorg Chem
June 2024
Aix Marseille Univ, CNRS, Centrale Méditerranée, iSm2, Marseille 13013, France.
In this paper, we employed a multidisciplinary approach, combining experimental techniques and density functional theory (DFT) calculations to elucidate key features of the copper coordination environment of the bacterial lytic polysaccharide monooxygenase (LPMO) from (AA10). The structure of the -enzyme was successfully obtained by X-ray crystallography. We then determined the copper(II) binding affinity using competing ligands and observed that the affinity of the histidine brace ligands for copper is significantly higher than previously described.
View Article and Find Full Text PDFJACS Au
April 2024
Department of Chemistry and Applied Biosciences (D-CHAB), Swiss Federal Institute of Technology Zürich (ETHZ), Vladimir-Prelog-Weg 2, CH-8093 Zürich, Switzerland.
We investigated room-temperature metal and ligand K-edge X-ray absorption (XAS) spectra of a complete redox series of cubane-type iron-sulfur clusters. The Fe K-edge position provides a qualitative but convenient alternative to the traditional spectroscopic descriptors used to identify oxidation states in these systems, which we demonstrate by providing a calibration curve based on two analytic methods. Furthermore, high energy resolution fluorescence detected XAS (HERFD-XAS) at the S K-edge was used to measure Fe-S bond covalencies and record their variation with the average valence of the Fe atoms.
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