The human genome is susceptible to change; base mismatches can arise from damaged DNA, replication errors, and spontaneous mutation, and have the potential to cause apoptosis, carcinogenesis, and mutagenesis. Many techniques have been developed for DNA mismatch detection, but many of these methods have complex, time-consuming procedures and are limited to the detection of specific types of DNA mismatches. In this work, we present a general method for the simple and sensitive nucleobase-sensitized luminescent detection of mismatches in double-stranded DNA (dsDNA) using terbium ions. Terbium ions luminesce differently depending on the site of coordination in DNA due to the proximity effect of the energy transfer process that occurs from excited, non-hydrogen bonded nucleobases in single-stranded DNA (ssDNA) regions to the terbium ions. We examined the effect of location and number of mismatches on the sensitivity and selectivity of this probe in both synthetic oligonucleotides containing mismatches and natural calf thymus DNA exposed to UV light to induce reduced base pairing due to damage. This method shows good sensitivity for the determination of DNA mismatches, with limit of detection and limit of quantification of 1 and 3 mismatches, respectively, per dsDNA sequence.
Download full-text PDF |
Source |
|---|---|
| http://dx.doi.org/10.1016/j.aca.2017.09.036 | DOI Listing |
Publication Analysis
Top Keywords
Similar Publications
Mechanoluminescence from Organic-Inorganic Metal Halide Perovskite Derivative.
Adv Sci (Weinh)
January 2025
Institute of Frontier Chemistry, School of Chemistry and Chemical Engineering, Shandong University, Qingdao, 266237, P. R. China.
Metal halide perovskites and their derivatives are gaining significant attention as photoluminescent materials due to their exceptional light-emitting properties. However, most research has concentrated on electroluminescence and photoluminescence, there remains a substantial gap in the exploration of mechanoluminescence (ML) properties in perovskites, making this field largely uncharted. ML is an ancient and intriguing luminescent phenomenon that occurs when a material is subjected to mechanical forces.
View Article and Find Full Text PDFThe Impact of Silver Codoping on Tb Luminescence in Lithium Tetraborate Glasses.
Luminescence
January 2025
Vlokh Institute of Physical Optics, Ivan Franko National University of Lviv, Lviv, Ukraine.
Spectroscopic properties of Tb-doped and Tb-Ag codoped lithium tetraborate (LTB) glasses with LiBO (or LiO-2BO) composition are investigated and analysed using electron paramagnetic resonance (EPR), optical absorption, photoluminescence (PL) and photoluminescence excitation (PLE) spectra, PL decay kinetics and absolute quantum yield (QY) measurements. PL spectra of the investigated glasses show numerous narrow emission bands corresponding to the D → F (J = 6-0) and D → F (J = 5-3) transitions of Tb (4f) ions. The most intense PL band of Tb ions at 541 nm (D → F transition) is characterised by a lifetime slightly exceeding 2.
View Article and Find Full Text PDFVisual detection of ciprofloxacin using a multi-emission ratiometric fluorescence sensor based on the molecularly imprinted polymers doped with terbium(III) ions.
Talanta
January 2025
School of Pharmacy, Binzhou Medical University, Yantai, 264003, China. Electronic address:
Ciprofloxacin (CIP) is a commonly used antibiotic, but its abuse may cause bacterial resistance, posing a high risk to the environment and human health. Herein, based on the molecular imprinting technology, this study proposed a ratiometric fluorescence sensor employing the "post-doping" strategy, which aims to be rapid, selective, and visually easy-to-use for CIP detection to address antibiotic residues and environmental risks. Specifically, by exploiting the "antenna effect" of lanthanide metal ions (Ln), terbium (III) (Tb) chosen as a fluorescence-assisted functional monomer as well as the red emitting CdTe quantum dots (QDs) as the internal reference signal were introduced into multi-emission Tb-CdTe@SiO@MIPs (TbMIPs).
View Article and Find Full Text PDFA luminescent lanthanide functionalized hydrogen-bonded organic framework hydrogel: Fluorescence sensing platform for copper and iron ions detection.
Talanta
April 2025
State Key Laboratory of Pollution Control and Resource Reuse, College of Environmental Science & Engineering, Shanghai Institute of Pollution Control and Ecological Security, Tongji University, 1239 Siping Road, Shanghai, 200092, China. Electronic address:
The excessive presence of the metal ions Cu and Fe in the environment poses a serious threat to ecosystems and human health, so timely and accurate detection of them has become essential and urgent. In this paper, a novel hydrogel-based fluorescent sensor, named ME-IPA@SA-TbZn, was fabricated facilely through an in-situ cross-linking modification method and was used for the detection of Cu and Fe in water bodies. The ME-IPA@SA-TbZn is essentially a hybrid hydrogel bead that exhibits vibrant fluorescence, employing Tb and Zn functionalized hydrogen-bonded organic frameworks (HOFs) as the fluorescence functional core and sodium alginate (SA) as the hydrogel matrix.
View Article and Find Full Text PDFLanthanide binding peptide surfactants at air-aqueous interfaces for interfacial separation of rare earth elements.
Proc Natl Acad Sci U S A
December 2024
Department of Chemical Engineering, The City College of New York, New York, NY 10031.
Rare earth elements (REEs) are critical materials to modern technologies. They are obtained by selective separation from mining feedstocks consisting of mixtures of their trivalent cation. We are developing an all-aqueous, bioinspired, interfacial separation using peptides as amphiphilic molecular extractants.
View Article and Find Full Text PDFWant AI Summaries of new PubMed Abstracts delivered to your In-box?
Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!