Mapping platinum adducts on yeast ribosomal RNA using high-throughput sequencing.

Chem Commun (Camb)

Department of Chemistry and Biochemistry and Institute of Molecular Biology, University of Oregon, Eugene, OR 97403, USA.

Published: November 2017

Methods to map small-molecule binding sites on cellular RNAs are important for understanding interactions with both endogenous and exogenous compounds. Pt(ii) reagents are well-known DNA and RNA crosslinking agents, but sequence-specific and genome-wide identification of Pt targets following in-cell treatment is challenging. Here we describe application of high-throughput 'Pt-Seq' to identify Pt-rRNA adducts following treatment of S. cerevisiae with cisplatin.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5729026PMC
http://dx.doi.org/10.1039/c7cc06708aDOI Listing

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