A procedure is proposed to produce intermolecular potential energy surfaces from limited data. The procedure involves generation of geometrical configurations using a Latin hypercube design, with a maximin criterion, based on inverse internuclear distances. Gaussian processes are used to interpolate the data, using over-specified inverse molecular distances as covariates, greatly improving the interpolation. Symmetric covariance functions are specified so that the interpolation surface obeys all relevant symmetries, reducing prediction errors. The interpolation scheme can be applied to many important molecular interactions with trivial modifications. Results are presented for three systems involving CO, a system with a deep energy minimum (HF-HF), and a system with 48 symmetries (CH-N). In each case, the procedure accurately predicts an independent test set. Training this method with high-precision ab initio evaluations of the CO-CO interaction enables a parameter-free, first-principles prediction of the CO-CO cross virial coefficient that agrees very well with experiments.
Download full-text PDF |
Source |
---|---|
http://dx.doi.org/10.1063/1.4986489 | DOI Listing |
Fish Physiol Biochem
January 2025
Department of Structural and Functional Biology, Institute of Biosciences, São Paulo State University (UNESP), Botucatu, São Paulo, Brazil.
Pituitary gland morphogenesis and the ontogeny of the adenohypophyseal (AH) cells of Astyanax lacustris are presented herein. This Characiformes species shows great ecological and commercial importance, and it has been increasingly used as animal model. For this study, A.
View Article and Find Full Text PDFJ Math Biol
January 2025
School of Mathematics and Statistics, Northeast Normal University, 5268 Renmin Street, Changchun, 130024, Jilin, People's Republic of China.
Wild birds are one of the main natural reservoirs for avian influenza viruses, and their migratory behavior significantly influences the transmission of avian influenza. To better describe the migratory behavior of wild birds, a system of reaction-advection-diffusion equations is developed to characterize the interactions among wild birds, poultry, and humans. By the next-generation operator, the basic reproduction number of the model is formulated.
View Article and Find Full Text PDFSci Rep
January 2025
Department of Structural Engineering, Faculty of Engineering, Mansoura University, Mansoura, Egypt.
Concrete-filled double-skin steel tubular (CFDST) columns have become widely utilized in building construction and bridges, thanks to their exceptional structural capabilities. Therefore, this study investigates the axial compressive behavior of square CFDST columns. The study aims to explore the influence of external and internal plate shapes (flat or corrugated plates) and different widths of internal steel tubes on the axial compressive behavior.
View Article and Find Full Text PDFLight Sci Appl
January 2025
Spin-Optics laboratory, St. Petersburg State University, St. Petersburg, 198504, Russia.
We introduce a novel neuromorphic network architecture based on a lattice of exciton-polariton condensates, intricately interconnected and energized through nonresonant optical pumping. The network employs a binary framework, where each neuron, facilitated by the spatial coherence of pairwise coupled condensates, performs binary operations. This coherence, emerging from the ballistic propagation of polaritons, ensures efficient, network-wide communication.
View Article and Find Full Text PDFIUCrJ
March 2025
RNA Therapeutics Institute, University of Massachusetts Chan Medical School, Worcester, USA.
2D template matching (2DTM) can be used to detect molecules and their assemblies in cellular cryo-EM images with high positional and orientational accuracy. While 2DTM successfully detects spherical targets such as large ribosomal subunits, challenges remain in detecting smaller and more aspherical targets in various environments. In this work, a novel 2DTM metric, referred to as the 2DTM p-value, is developed to extend the 2DTM framework to more complex applications.
View Article and Find Full Text PDFEnter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!