Phenotypic Graphs and Evolution Unfold the Standard Genetic Code as the Optimal.

Orig Life Evol Biosph

Theoretical Biology Group, Instituto de Investigaciones Biomédicas, Universidad Nacional Autónoma de México, C.P. 04510, Ciudad de México CDMX, Mexico.

Published: March 2018

In this work, we explicitly consider the evolution of the Standard Genetic Code (SGC) by assuming two evolutionary stages, to wit, the primeval RNY code and two intermediate codes in between. We used network theory and graph theory to measure the connectivity of each phenotypic graph. The connectivity values are compared to the values of the codes under different randomization scenarios. An error-correcting optimal code is one in which the algebraic connectivity is minimized. We show that the SGC is optimal in regard to its robustness and error-tolerance when compared to all random codes under different assumptions.

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http://dx.doi.org/10.1007/s11084-017-9552-3DOI Listing

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