A multiple genome analysis of Mycobacterium tuberculosis reveals specific novel genes and mutations associated with pyrazinamide resistance.

BMC Genomics

Laboratorio de Bioinformática y Biología Molecular. Laboratorios de Investigación y Desarrollo, Facultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia, Av. Honorio Delgado 430, San Martín de Porras, 31, Lima, Peru.

Published: October 2017

AI Article Synopsis

  • Tuberculosis (TB) is a significant global health issue, with drug resistance, especially to Pyrazinamide (PZA), complicating treatment efforts.
  • Researchers analyzed 68 M. tuberculosis strains from TB patients in Peru, identifying no clear genetic clustering but discovering mutations in the pncA gene and other novel genes linked to PZA resistance.
  • These findings indicate that PZA resistance may involve multiple mechanisms, suggesting that the drug targets several biological pathways instead of just one.

Article Abstract

Background: Tuberculosis (TB) is a major global health problem and drug resistance compromises the efforts to control this disease. Pyrazinamide (PZA) is an important drug used in both first and second line treatment regimes. However, its complete mechanism of action and resistance remains unclear.

Results: We genotyped and sequenced the complete genomes of 68 M. tuberculosis strains isolated from unrelated TB patients in Peru. No clustering pattern of the strains was verified based on spoligotyping. We analyzed the association between PZA resistance with non-synonymous mutations and specific genes. We found mutations in pncA and novel genes significantly associated with PZA resistance in strains without pncA mutations. These included genes related to transportation of metal ions, pH regulation and immune system evasion.

Conclusions: These results suggest potential alternate mechanisms of PZA resistance that have not been found in other populations, supporting that the antibacterial activity of PZA may hit multiple targets.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5637355PMC
http://dx.doi.org/10.1186/s12864-017-4146-zDOI Listing

Publication Analysis

Top Keywords

pza resistance
12
novel genes
8
genes mutations
8
resistance
6
pza
5
multiple genome
4
genome analysis
4
analysis mycobacterium
4
mycobacterium tuberculosis
4
tuberculosis reveals
4

Similar Publications

The epidemiology and gene mutation characteristics of pyrazinamide-resistant clinical isolates in Southern China.

Emerg Microbes Infect

December 2025

State Key Laboratory of Respiratory Disease, Guangzhou Key Laboratory of Tuberculosis Research, Department of Tuberculosis, Guangzhou Chest Hospital, Institute of Tuberculosis, Guangzhou Medical University, Guangdong, People's Republic of China.

This study investigates the epidemic trend of pyrazinamide (PZA)-resistant tuberculosis in Southern China over 11 years (2012-2022) and evaluates the mutation characteristics of PZA resistance-related genes ( and ) in clinical () isolates. To fulfil these goals, we analyzed the phenotypic PZA resistance characteristics of 14,927 clinical isolates for which Bactec MGIT 960 PZA drug susceptibility testing (DST) results were available, revealing that 2,054 (13.76%) isolates were resistant to PZA.

View Article and Find Full Text PDF

The material for drug resistance testing was 28 strains of Mycobacterium caprae isolated from tissue collected post mortem from a free-living Bieszczady Mountain European bison (Bison bonasus caucasicus) herd. All drug susceptibility tests were carried out on an automated Bactec mycobacterial growth indicator tube (MGIT) 960 system, using Bactec MGIT 960 streptomycin, isoniazid, rifampin and ethambutol (S.I.

View Article and Find Full Text PDF

Examining effective monotherapy hypothesis for TB therapy failure and resistance emergence.

Int J Tuberc Lung Dis

December 2024

Mathematical Modeling and AI, Praedicare Inc, Dallas, TX, USA;, Hollow Fiber System & Experimental Therapeutics Laboratories, Praedicare Inc, Dallas, TX, USA.

Article Synopsis
  • The study investigated whether different metabolic states of Mycobacterium tuberculosis (Mtb) in lesions cause drugs used in combination therapy to act like they are used alone, potentially leading to therapy failure and drug resistance.
  • The team tested various drug combinations, including isoniazid, rifampin, and pyrazinamide, using a hollow fiber system to see their effects on Mtb over 28 days.
  • Results showed isoniazid was the most effective at killing Mtb, and no increase in drug-resistant strains was observed, suggesting that the emergence of resistance may not solely be due to the effectiveness of single-drug therapies.
View Article and Find Full Text PDF

A simplified pyrazinamidase test for pyrazinamide antimicrobial susceptibility testing.

J Clin Microbiol

December 2024

Tuberculosis Research Center, Centers for Disease Control, Ministry of Health and Welfare, Taipei, Taiwan.

Unlabelled: Pyrazinamide (PZA) is an important first-line drug for tuberculosis (TB) treatment by eradicating the persisting complex (MTBC). Due to cost and technical challenges, end TB strategies are hampered by the lack of a simple and reliable culture-based PZA antimicrobial susceptibility testing (AST) for routine use. We initially developed a simplified chromogenic pyrazinamidase (PZase) test in the TB reference laboratory using a training set MTBC isolates with various drug-resistant profiles, and validated its performance using consecutive BACTEC MGIT 960 (MGIT)-culture-positive culture in 10 clinical laboratories.

View Article and Find Full Text PDF

Quantitative MODS-Wayne assay for rapid detection of pyrazinamide resistance in from sputum samples.

Microbiol Spectr

November 2024

Laboratorio de Bioinformática, Biología Molecular y Desarrollos Tecnológicos. Laboratorios de Investigación y Desarrollo. Facultad de Ciencias e Ingeniería. Universidad Peruana Cayetano Heredia, Lima, Peru.

Unlabelled: Tuberculosis (TB) remains a significant global health challenge, exacerbated by the emergence of drug-resistant strains, such as those resistant to pyrazinamide (PZA). The current scarcity of affordable and precise quantitative diagnostic tests for PZA resistance underscores the urgent need for more accessible diagnostic tools. We evaluated PZA susceptibility in 264 TB-positive samples by quantifying pyrazinoic acid (POA) production, using both the MODS-Wayne qualitative assay and our newly developed quantitative approach (MODS-WQ).

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!