An algorithm for modelling the background for each Bragg reflection in a series of X-ray diffraction images containing Debye-Scherrer diffraction from ice in the sample is presented. The method involves the use of a global background model which is generated from the complete X-ray diffraction data set. Fitting of this model to the background pixels is then performed for each reflection independently. The algorithm uses a static background model that does not vary over the course of the scan. The greatest improvement can be expected for data where ice rings are present throughout the data set and the local background shape at the size of a spot on the detector does not exhibit large time-dependent variation. However, the algorithm has been applied to data sets whose background showed large pixel variations (variance/mean > 2) and has been shown to improve the results of processing for these data sets. It is shown that the use of a simple flat-background model as in traditional integration programs causes systematic bias in the background determination at ice-ring resolutions, resulting in an overestimation of reflection intensities at the peaks of the ice rings and an underestimation of reflection intensities either side of the ice ring. The new global background-model algorithm presented here corrects for this bias, resulting in a noticeable improvement in factors following refinement.
Download full-text PDF |
Source |
---|---|
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5619854 | PMC |
http://dx.doi.org/10.1107/S2052252517010259 | DOI Listing |
Mutat Res Genet Toxicol Environ Mutagen
October 2024
Laboratorio de Citogenética y Mutagénesis, Instituto Multidisciplinario de Biología Celular (IMBICE, CONICET-UNLP-CICPBA), calle 526 y Camino General Belgrano, La Plata, Buenos Aires B1906APO, Argentina; Universidad Nacional de La Plata, Facultad de Ciencias Naturales y Museo, calle 60 y 122, La Plata, Buenos Aires, Argentina. Electronic address:
We have evaluated the induction of complete (i.e., without open ends) and incomplete (i.
View Article and Find Full Text PDFClim Dyn
March 2024
Nature Rings - Environmental Research and Education, Mainz, Germany.
Cell
July 2024
Research Group Olfactory Coding, Max Planck Institute for Chemical Ecology, 07745 Jena, Germany. Electronic address:
The representation of odors in the locust antennal lobe with its >2,000 glomeruli has long remained a perplexing puzzle. We employed the CRISPR-Cas9 system to generate transgenic locusts expressing the genetically encoded calcium indicator GCaMP in olfactory sensory neurons. Using two-photon functional imaging, we mapped the spatial activation patterns representing a wide range of ecologically relevant odors across all six developmental stages.
View Article and Find Full Text PDFNat Astron
March 2024
Laboratory for Atmospheric and Space Physics, University of Colorado Boulder, Boulder, CO USA.
Jupiter's moon Europa has a predominantly water-ice surface that is modified by exposure to its space environment. Charged particles break molecular bonds in surface ice, thus dissociating the water to ultimately produce H and O, which provides a potential oxygenation mechanism for Europa's subsurface ocean. These species are understood to form Europa's primary atmospheric constituents.
View Article and Find Full Text PDFACS Nano
May 2024
ESRF - The European Synchrotron, 71 Avenue des Martyrs, 38043 Grenoble, France.
Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!