Building models of a biological system that are consistent with the myriad data available is one of the key challenges in biology. Modeling the structure and dynamics of macromolecular assemblies, for example, can give insights into how biological systems work, evolved, might be controlled, and even designed. Integrative structure modeling casts the building of structural models as a computational optimization problem, for which information about the assembly is encoded into a scoring function that evaluates candidate models. Here, we describe our open source software suite for integrative structure modeling, Integrative Modeling Platform (https://integrativemodeling.org), and demonstrate its use.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5734277PMC
http://dx.doi.org/10.1002/pro.3311DOI Listing

Publication Analysis

Top Keywords

integrative structure
12
structure modeling
12
modeling integrative
8
integrative modeling
8
modeling platform
8
modeling
6
integrative
5
platform building
4
building models
4
models biological
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!