Biophysical and computational characterization of vandetanib-lysozyme interaction.

Spectrochim Acta A Mol Biomol Spectrosc

Biomolecular Research Group, Biochemistry Programme, Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia; Centre of Research for Computational Sciences and Informatics for Biology, Bioindustry, Environment, Agriculture and Healthcare, University of Malaya, Kuala Lumpur, Malaysia. Electronic address:

Published: January 2018

AI Article Synopsis

  • The interaction between the anticancer drug vandetanib (VDB) and the ligand transporter lysozyme (LYZ) was studied using various spectroscopic techniques and computational analysis to confirm their complex formation.
  • The findings revealed that VDB binds to LYZ through weak interactions, characterized by a binding constant and thermodynamic parameters indicating the role of hydrophobic and van der Waals forces, along with hydrogen bonds.
  • Additionally, VDB enhances the thermal stability of LYZ while its binding site is near the LYZ active site, with certain metal ions like Mg, Ba, and Zn disrupting this interaction.

Article Abstract

Interaction of an anticancer drug, vandetanib (VDB) with a ligand transporter, lysozyme (LYZ) was explored using multispectroscopic techniques, such as fluorescence, absorption and circular dichroism along with computational analysis. Fluorescence data and absorption results confirmed VDB-LYZ complexation. VDB-induced quenching was characterized as static quenching based on inverse correlation of K with temperature as well as k values. The complex was characterized by the weak binding constant (K=4.96-3.14×10M). Thermodynamic data (ΔS=+12.82JmolK; ΔH=-16.73kJmol) of VDB-LYZ interaction revealed participation of hydrophobic and van der Waals forces along with hydrogen bonds in VDB-LYZ complexation. Microenvironmental perturbations around tryptophan and tyrosine residues as well as secondary and tertiary structural alterations in LYZ upon addition of VDB were evident from the 3-D fluorescence, far- and near-UV CD spectral analyses, respectively. Interestingly, addition of VDB to LYZ significantly increased protein's thermostability. Molecular docking results suggested the location of VDB binding site near the LYZ active site while molecular dynamics simulation results suggested stability of VDB-LYZ complex. Presence of Mg, Ba and Zn was found to interfere with VDB-LYZ interaction.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.saa.2017.08.051DOI Listing

Publication Analysis

Top Keywords

vdb-lyz complexation
8
vdb-lyz interaction
8
addition vdb
8
vdb-lyz
5
biophysical computational
4
computational characterization
4
characterization vandetanib-lysozyme
4
interaction
4
vandetanib-lysozyme interaction
4
interaction interaction
4

Similar Publications

Biophysical and computational characterization of vandetanib-lysozyme interaction.

Spectrochim Acta A Mol Biomol Spectrosc

January 2018

Biomolecular Research Group, Biochemistry Programme, Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia; Centre of Research for Computational Sciences and Informatics for Biology, Bioindustry, Environment, Agriculture and Healthcare, University of Malaya, Kuala Lumpur, Malaysia. Electronic address:

Article Synopsis
  • The interaction between the anticancer drug vandetanib (VDB) and the ligand transporter lysozyme (LYZ) was studied using various spectroscopic techniques and computational analysis to confirm their complex formation.
  • The findings revealed that VDB binds to LYZ through weak interactions, characterized by a binding constant and thermodynamic parameters indicating the role of hydrophobic and van der Waals forces, along with hydrogen bonds.
  • Additionally, VDB enhances the thermal stability of LYZ while its binding site is near the LYZ active site, with certain metal ions like Mg, Ba, and Zn disrupting this interaction.
View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!