Parasitic nematodes pose a serious threat to agriculture, livestock, and human health. Increasing resistance to antiparasitic agents underscores the need to replenish our anthelmintic arsenal. The nonpathogenic Caenorhabditis elegans, which serves as an effective model of parasitic helminths, has been used to search for new anthelmintic leads. We previously reported small-molecule inhibitors of the essential C. elegans protein UDP-galactopyranose mutase (UGM or Glf). This enzyme is required for the generation of galactofuranose (Galf)-containing glycans and is needed in nematodes for proper cuticle formation. Though our first-generation inhibitors were effective in vitro, they elicited no phenotypic effects. These findings are consistent with the known difficulty of targeting nematodes. C. elegans is recalcitrant to pharmacological modulation; typically, less than 0.02% of small molecules elicit a phenotypic effect, even at 40 μM. We postulated that the lack of activity of the UGM inhibitors was due to their carboxylic acid group, which can be exploited by nematodes for detoxification. We therefore tested whether replacement of the carboxylate with an N-acylsulfonamide surrogate would result in active compounds. UGM inhibitors with the carboxylate mimetic can phenocopy the deleterious consequences of UGM depletion in C. elegans. These findings support the use of UGM inhibitors as anthelmintic agents. They also outline a strategy to render small-molecule carboxylates more effective against nematodes.
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http://dx.doi.org/10.1021/acschembio.7b00487 | DOI Listing |
Sci Rep
June 2024
Department of Pharmacology and Therapy, Faculty of Medicine Public Health and Nursing, Universitas Gadjah Mada, Yogyakarta, 55281, Indonesia.
Protein kinase dysregulation induces cancer cell aggressiveness leading to rapid tumor progression and poor prognosis in TNBC patients. Many small-molecule kinase inhibitors have been tested in clinical trials to treat TNBC patients. In the previous study, we found that N-phenylpyrazoline small molecule acts as a protein kinase inhibitor in cervical cancer cells.
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November 2023
Department of Geological Engineering, Faculty of Engineering, Universitas Gadjah Mada, Jalan Grafika No. 2 Kampus UGM Bulaksumur, Yogyakarta, Daerah Istimewa Yogyakarta 55281, Indonesia.
Understanding the inhibitory factors affecting the adsorption of CO on low-rank coal from shallow-depth coal seams is essential to identify potential coal seams for CO sequestration. The CO adsorption capacity of shallow-depth coals was measured at a low pressure on raw and dry coals. The samples were also prepared for organic analyses, scanning electron microscopy analyses, and low-temperature nitrogen adsorption analyses to evaluate the CO adsorption and identify the inhibitory factors.
View Article and Find Full Text PDFDaru
June 2024
Laboratory of Macromolecular Engineering, Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Universitas Gadjah Mada Sekip Utara II, 55281, Yogyakarta, Indonesia.
Background: COVID-19 is an infectious disease caused by SARS-CoV-2, a close relative of SARS-CoV. Several studies have searched for COVID-19 therapies. The topics of these works ranged from vaccine discovery to natural products targeting the SARS-CoV-2 main protease (M), a potential therapeutic target due to its essential role in replication and conserved sequences.
View Article and Find Full Text PDFBMC Genom Data
September 2022
Cancer Chemoprevention Research Center, Faculty of Pharmacy, Universitas Gadjah Mada Sekip Utara II, Yogyakarta, 55281, Indonesia.
Background: Several studies have demonstrated the antitumor activity of rosiglitazone (RGZ) in cancer cells, including breast cancer cells. However, the molecular targets of RGZ in the inhibition of angiogenesis in breast cancer cells remain unclear. This study aimed to explore the potential targets of RGZ in inhibiting breast cancer angiogenesis using bioinformatics-based analysis.
View Article and Find Full Text PDFMed J Malaysia
July 2022
Universitas Gadjah Mada/ Dr. Sardjito Hospital, Public Health and Nursing, Faculty of Medicine, Department of Anatomical Pathology, Sleman, Yogyakarta, Indonesia.
Introduction: Urothelial carcinoma (UC) is the most common type of bladder cancer. One of the treatments that are currently being explored for UC involves the use of immune checkpoint inhibitors, especially those targeting PD-1/PD-L1 interaction. This interaction has been previously suggested to aid in the prediction of outcomes.
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