Importance of R-CF···O Tetrel Bonding Interactions in Biological Systems.

J Phys Chem A

Department of Chemistry, Universitat de les Illes Balears, Crta. De Valldemossa km 7.5, 07122 Palma de Mallorca (Baleares), Spain.

Published: July 2017

In this article, ab initio calculations have been combined with a search in the Protein Data Bank (PDB) to demonstrate the importance of σ-hole tetrel bonding interactions in biological systems. In particular, we focus our attention on the ability of the -CF group to participate in noncovalent interactions as Lewis acids, and we show the importance of this interaction in the inhibition mechanism of a NADP-dependent isocitrate dehydrogenase (IDH) enzyme that converts isocitrate to α-ketoglutarate. IDH mutations are found in multiple hematologic and solid tumors, inducing premalignant disorders. A potent triazine-based inhibitor of the mutant IDH (enasidenib) presents two -CF groups in the structure. One establishes a tetrel bonding interaction with an aspartate residue that contributes to the binding and selectivity of the inhibitor to the active site.

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Source
http://dx.doi.org/10.1021/acs.jpca.7b06052DOI Listing

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